RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 GFRA4Q9GZZ7 299 aa3.62□□□□□ -1.83
LINC00353-201ENST00000435401 ABCF3Q9NUQ8 709 aa3.62□□□□□ -1.83
LINC00353-201ENST00000435401 SLC38A7Q9NVC3 462 aa3.62□□□□□ -1.83
LINC00353-201ENST00000435401 CHCHD3Q9NX63 227 aaKnown RBP3.62□□□□□ -1.83
LINC00353-201ENST00000435401 WDR97A6NE52 1622 aa3.62□□□□□ -1.83
LINC00353-201ENST00000435401 TARBP1Q13395 1621 aaKnown RBP3.62□□□□□ -1.83
LINC00353-201ENST00000435401 MYH15Q9Y2K3 1946 aa3.62□□□□□ -1.83
LINC00353-201ENST00000435401 A0A1B0GVY2 172 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 PTGESO14684 152 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 CAPN9O14815 690 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 SYNGR3O43761 229 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 TSPAN1O60635 241 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 ACSL3O95573 720 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 PENKP01210 267 aaPredicted RBP3.61□□□□□ -1.83
LINC00353-201ENST00000435401 H1F0P07305 194 aaKnown RBP3.61□□□□□ -1.83
LINC00353-201ENST00000435401 CCDC175P0C221 793 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 PTAFRP25105 342 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 EPHA2P29317 976 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 PCGF2P35227 344 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 TIMP3P35625 211 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 MLLT10P55197 1068 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 PTPRCAPQ14761 206 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 PSMD6Q15008 389 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 HYAL4Q2M3T9 481 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 C14orf177Q52M58 125 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 TRAT1Q6PIZ9 186 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 CCDC186Q7Z3E2 898 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 DNAJB7Q7Z6W7 309 aaPredicted RBP3.61□□□□□ -1.83
LINC00353-201ENST00000435401 COMMD2Q86X83 199 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 ZNF843Q8N446 348 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 CPSF7Q8N684 471 aaKnown RBP3.61□□□□□ -1.83
LINC00353-201ENST00000435401 SLC24A4Q8NFF2 622 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 OR13J1Q8NGT2 312 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 KIF18AQ8NI77 898 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 FGFBP3Q8TAT2 258 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 RNF128Q8TEB7 428 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 SLAMF9Q96A28 289 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 ARSGQ96EG1 525 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 ALG14Q96F25 216 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 ZNF583Q96ND8 569 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 WNT5BQ9H1J7 359 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 APOBEC3GQ9HC16 384 aaKnown RBP3.61□□□□□ -1.83
LINC00353-201ENST00000435401 SH3GLB2Q9NR46 395 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 B3GAT1Q9P2W7 334 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 ANAPC5Q9UJX4 755 aa3.61□□□□□ -1.83
LINC00353-201ENST00000435401 FAF1Q9UNN5 650 aaPredicted RBP3.61□□□□□ -1.83
LINC00353-201ENST00000435401 ARID2Q68CP9 1835 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 AQRO60306 1485 aaKnown RBP eCLIP3.6□□□□□ -1.83
LINC00353-201ENST00000435401 IFT140Q96RY7 1462 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 CUX1P39880 1505 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 ABCC8Q09428 1581 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 IGLV5-45A0A087WSX0 123 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 A0A1W2PPQ1 181 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 A0A1W2PS18 150 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 WDPCPO95876 746 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 TBX6O95947 436 aaPredicted RBP3.6□□□□□ -1.83
LINC00353-201ENST00000435401 ERCC2P18074 760 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 MSH3P20585 1137 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 MARK3P27448 753 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 ZNF75DP51815 510 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 MAPK12P53778 367 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 POLR2LP62875 67 aaKnown RBP3.6□□□□□ -1.83
LINC00353-201ENST00000435401 PDSS1Q5T2R2 415 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 KRT39Q6A163 491 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 CORO6Q6QEF8 472 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 PPP1R21Q6ZMI0 780 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 KRT77Q7Z794 578 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 MYPOPQ86VE0 399 aaPredicted RBP3.6□□□□□ -1.83
LINC00353-201ENST00000435401 CFAP206Q8IYR0 622 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 ZNF473Q8WTR7 871 aaKnown RBP3.6□□□□□ -1.83
LINC00353-201ENST00000435401 SYN2Q92777 582 aaPredicted RBP3.6□□□□□ -1.83
LINC00353-201ENST00000435401 OTUB1Q96FW1 271 aaPredicted RBP3.6□□□□□ -1.83
LINC00353-201ENST00000435401 SFXN2Q96NB2 322 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 PSD2Q9BQI7 771 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 BTBD10Q9BSF8 475 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 LRRC1Q9BTT6 524 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 VN1R1Q9GZP7 353 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 S1PR5Q9H228 398 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 PIH1D3Q9NQM4 214 aaKnown RBP3.6□□□□□ -1.83
LINC00353-201ENST00000435401 DPP3Q9NY33 737 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 IL17BQ9UHF5 180 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 MTUS1Q9ULD2 1270 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 JRKLQ9Y4A0 524 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 LIPGQ9Y5X9 500 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 POLA1P09884 1462 aaPredicted RBP3.6□□□□□ -1.83
LINC00353-201ENST00000435401 FGD5Q6ZNL6 1462 aa3.6□□□□□ -1.83
LINC00353-201ENST00000435401 A0A1B0GU03 582 aa3.59□□□□□ -1.83
LINC00353-201ENST00000435401 A0A1W2PRQ8 180 aa3.59□□□□□ -1.83
LINC00353-201ENST00000435401 MED19A0JLT2 244 aaPredicted RBP3.59□□□□□ -1.83
LINC00353-201ENST00000435401 E9PI62 339 aa3.59□□□□□ -1.83
LINC00353-201ENST00000435401 PDE9AO76083 593 aa3.59□□□□□ -1.83
LINC00353-201ENST00000435401 RECQL5O94762 991 aaPredicted RBP3.59□□□□□ -1.83
LINC00353-201ENST00000435401 IGHV4-39P01824 125 aa3.59□□□□□ -1.83
LINC00353-201ENST00000435401 ATP5BP06576 529 aaKnown RBP3.59□□□□□ -1.83
LINC00353-201ENST00000435401 QDPRP09417 244 aa3.59□□□□□ -1.83
LINC00353-201ENST00000435401 RAB40ALP0C0E4 278 aa3.59□□□□□ -1.83
LINC00353-201ENST00000435401 FDPSP14324 419 aaKnown RBP3.59□□□□□ -1.83
LINC00353-201ENST00000435401 ZNF23P17027 643 aa3.59□□□□□ -1.83
LINC00353-201ENST00000435401 CD22P20273 847 aa3.59□□□□□ -1.83
LINC00353-201ENST00000435401 JAK1P23458 1154 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 209.3 ms