RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 ARID3BQ8IVW6 561 aaPredicted RBP2.96□□□□□ -1.94
PTPN4-205ENST00000433888 SCYL3Q8IZE3 742 aa2.96□□□□□ -1.94
PTPN4-205ENST00000433888 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.96□□□□□ -1.94
PTPN4-205ENST00000433888 PHLDA1Q8WV24 401 aaPredicted RBP2.96□□□□□ -1.94
PTPN4-205ENST00000433888 UCMAQ8WVF2 138 aa2.96□□□□□ -1.94
PTPN4-205ENST00000433888 IRGQQ8WZA9 623 aa2.96□□□□□ -1.94
PTPN4-205ENST00000433888 ARSGQ96EG1 525 aa2.96□□□□□ -1.94
PTPN4-205ENST00000433888 C10orf90Q96M02 699 aa2.96□□□□□ -1.94
PTPN4-205ENST00000433888 TBATAQ96M53 351 aa2.96□□□□□ -1.94
PTPN4-205ENST00000433888 PPM1MQ96MI6 270 aa2.96□□□□□ -1.94
PTPN4-205ENST00000433888 C1QTNF1Q9BXJ1 281 aa2.96□□□□□ -1.94
PTPN4-205ENST00000433888 RTN4RQ9BZR6 473 aa2.96□□□□□ -1.94
PTPN4-205ENST00000433888 DNAJC18Q9H819 358 aa2.96□□□□□ -1.94
PTPN4-205ENST00000433888 FGF21Q9NSA1 209 aa2.96□□□□□ -1.94
PTPN4-205ENST00000433888 MAN2C1Q9NTJ4 1040 aa2.96□□□□□ -1.94
PTPN4-205ENST00000433888 BLOC1S4Q9NUP1 217 aa2.96□□□□□ -1.94
PTPN4-205ENST00000433888 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.96□□□□□ -1.94
PTPN4-205ENST00000433888 HEPACAM2A8MVW5 462 aa2.95□□□□□ -1.94
PTPN4-205ENST00000433888 HS6ST1O60243 411 aa2.95□□□□□ -1.94
PTPN4-205ENST00000433888 GFPT2O94808 682 aa2.95□□□□□ -1.94
PTPN4-205ENST00000433888 TMEM63AO94886 807 aa2.95□□□□□ -1.94
PTPN4-205ENST00000433888 CCNDBP1O95273 360 aa2.95□□□□□ -1.94
PTPN4-205ENST00000433888 OR2C1O95371 312 aa2.95□□□□□ -1.94
PTPN4-205ENST00000433888 VTNP04004 478 aa2.95□□□□□ -1.94
PTPN4-205ENST00000433888 SRPRAP08240 638 aaKnown RBP2.95□□□□□ -1.94
PTPN4-205ENST00000433888 BCL3P20749 454 aa2.95□□□□□ -1.94
PTPN4-205ENST00000433888 CAPN3P20807 821 aa2.95□□□□□ -1.94
PTPN4-205ENST00000433888 PSMA4P25789 261 aaKnown RBP2.95□□□□□ -1.94
PTPN4-205ENST00000433888 CAMPP49913 170 aa2.95□□□□□ -1.94
PTPN4-205ENST00000433888 TSTQ16762 297 aaKnown RBP2.95□□□□□ -1.94
PTPN4-205ENST00000433888 ITPRIPL2Q3MIP1 535 aa2.95□□□□□ -1.94
PTPN4-205ENST00000433888 SLC25A53Q5H9E4 307 aa2.95□□□□□ -1.94
PTPN4-205ENST00000433888 C20orf194Q5TEA3 1177 aa2.95□□□□□ -1.94
PTPN4-205ENST00000433888 KIAA0930Q6ICG6 404 aaPredicted RBP2.95□□□□□ -1.94
PTPN4-205ENST00000433888 SARM1Q6SZW1 724 aa2.95□□□□□ -1.94
PTPN4-205ENST00000433888 PDILTQ8N807 584 aa2.95□□□□□ -1.94
PTPN4-205ENST00000433888 PPFIBP2Q8ND30 876 aa2.95□□□□□ -1.94
PTPN4-205ENST00000433888 OR6C1Q96RD1 312 aa2.95□□□□□ -1.94
PTPN4-205ENST00000433888 BTBD10Q9BSF8 475 aa2.95□□□□□ -1.94
PTPN4-205ENST00000433888 SHARPINQ9H0F6 387 aa2.95□□□□□ -1.94
PTPN4-205ENST00000433888 S1PR5Q9H228 398 aa2.95□□□□□ -1.94
PTPN4-205ENST00000433888 ZNF69Q9UC07 566 aa2.95□□□□□ -1.94
PTPN4-205ENST00000433888 AASSQ9UDR5 926 aa2.95□□□□□ -1.94
PTPN4-205ENST00000433888 TNNQ9UQP3 1299 aa2.95□□□□□ -1.94
PTPN4-205ENST00000433888 PPP2R2CQ9Y2T4 447 aa2.95□□□□□ -1.94
PTPN4-205ENST00000433888 PIAS3Q9Y6X2 628 aa2.95□□□□□ -1.94
PTPN4-205ENST00000433888 FRMD3A2A2Y4 597 aa2.94□□□□□ -1.94
PTPN4-205ENST00000433888 SHISA7A6NL88 538 aa2.94□□□□□ -1.94
PTPN4-205ENST00000433888 PHOX2AO14813 284 aa2.94□□□□□ -1.94
PTPN4-205ENST00000433888 RNASEH1O60930 286 aaKnown RBP2.94□□□□□ -1.94
PTPN4-205ENST00000433888 RSL1D1O76021 490 aaKnown RBP2.94□□□□□ -1.94
PTPN4-205ENST00000433888 WDPCPO95876 746 aa2.94□□□□□ -1.94
PTPN4-205ENST00000433888 RARGP13631 454 aa2.94□□□□□ -1.94
PTPN4-205ENST00000433888 FOLR2P14207 255 aa2.94□□□□□ -1.94
PTPN4-205ENST00000433888 PON1P27169 355 aa2.94□□□□□ -1.94
PTPN4-205ENST00000433888 SLC6A6P31641 620 aa2.94□□□□□ -1.94
PTPN4-205ENST00000433888 CSNK2BP67870 215 aa2.94□□□□□ -1.94
PTPN4-205ENST00000433888 IKQ13123 557 aaPredicted RBP2.94□□□□□ -1.94
PTPN4-205ENST00000433888 KRT32Q14532 448 aa2.94□□□□□ -1.94
PTPN4-205ENST00000433888 SQLEQ14534 574 aa2.94□□□□□ -1.94
PTPN4-205ENST00000433888 DLG2Q15700 870 aa2.94□□□□□ -1.94
PTPN4-205ENST00000433888 C15orf32Q32M92 178 aa2.94□□□□□ -1.94
PTPN4-205ENST00000433888 PDLIM3Q53GG5 364 aaPredicted RBP2.94□□□□□ -1.94
PTPN4-205ENST00000433888 FAAH2Q6GMR7 532 aa2.94□□□□□ -1.94
PTPN4-205ENST00000433888 SLC47A2Q86VL8 602 aa2.94□□□□□ -1.94
PTPN4-205ENST00000433888 KRTAP11-1Q8IUC1 163 aa2.94□□□□□ -1.94
PTPN4-205ENST00000433888 TMEM139Q8IV31 216 aa2.94□□□□□ -1.94
PTPN4-205ENST00000433888 MCEMP1Q8IX19 187 aa2.94□□□□□ -1.94
PTPN4-205ENST00000433888 VANGL1Q8TAA9 524 aaPredicted RBP2.94□□□□□ -1.94
PTPN4-205ENST00000433888 UBE2Q2Q8WVN8 375 aa2.94□□□□□ -1.94
PTPN4-205ENST00000433888 ZNF486Q96H40 463 aaPredicted RBP2.94□□□□□ -1.94
PTPN4-205ENST00000433888 NCAPGQ9BPX3 1015 aa2.94□□□□□ -1.94
PTPN4-205ENST00000433888 CHCHD6Q9BRQ6 235 aa2.94□□□□□ -1.94
PTPN4-205ENST00000433888 PUS3Q9BZE2 481 aaKnown RBP2.94□□□□□ -1.94
PTPN4-205ENST00000433888 IRAK4Q9NWZ3 460 aa2.94□□□□□ -1.94
PTPN4-205ENST00000433888 OSER1Q9NX31 292 aa2.94□□□□□ -1.94
PTPN4-205ENST00000433888 A0A1W2PR80 420 aa2.93□□□□□ -1.94
PTPN4-205ENST00000433888 ACOD1A6NK06 481 aa2.93□□□□□ -1.94
PTPN4-205ENST00000433888 SSX4O60224 188 aa2.93□□□□□ -1.94
PTPN4-205ENST00000433888 DDX58O95786 925 aaKnown RBP2.93□□□□□ -1.94
PTPN4-205ENST00000433888 IL4RP24394 825 aa2.93□□□□□ -1.94
PTPN4-205ENST00000433888 MAN1A1P33908 653 aa2.93□□□□□ -1.94
PTPN4-205ENST00000433888 MAZP56270 477 aaKnown RBP2.93□□□□□ -1.94
PTPN4-205ENST00000433888 KRTAP10-1P60331 282 aa2.93□□□□□ -1.94
PTPN4-205ENST00000433888 KCTD2Q14681 263 aa2.93□□□□□ -1.94
PTPN4-205ENST00000433888 TNIP1Q15025 636 aa2.93□□□□□ -1.94
PTPN4-205ENST00000433888 HYIQ5T013 277 aa2.93□□□□□ -1.94
PTPN4-205ENST00000433888 LYSMD4Q5XG99 296 aa2.93□□□□□ -1.94
PTPN4-205ENST00000433888 HAUS3Q68CZ6 603 aa2.93□□□□□ -1.94
PTPN4-205ENST00000433888 CFAP161Q6P656 301 aa2.93□□□□□ -1.94
PTPN4-205ENST00000433888 C16orf54Q6UWD8 224 aa2.93□□□□□ -1.94
PTPN4-205ENST00000433888 TMEM207Q6UWW9 146 aa2.93□□□□□ -1.94
PTPN4-205ENST00000433888 INTS8Q75QN2 995 aaKnown RBP2.93□□□□□ -1.94
PTPN4-205ENST00000433888 FAM114A1Q8IWE2 563 aa2.93□□□□□ -1.94
PTPN4-205ENST00000433888 AQP11Q8NBQ7 271 aa2.93□□□□□ -1.94
PTPN4-205ENST00000433888 NUP37Q8NFH4 326 aa2.93□□□□□ -1.94
PTPN4-205ENST00000433888 OR52N5Q8NH56 324 aa2.93□□□□□ -1.94
PTPN4-205ENST00000433888 OR1L3Q8NH93 324 aa2.93□□□□□ -1.94
PTPN4-205ENST00000433888 C11orf45Q8TAV5 145 aa2.93□□□□□ -1.94
PTPN4-205ENST00000433888 LRRC15Q8TF66 581 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms