RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 TNFP01375 233 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 KITP10721 976 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 ALOX15P16050 662 aaPredicted RBP17.74■□□□□ 0.43
HMGN1-206ENST00000431390 MPSTP25325 297 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 CD38P28907 300 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 HSPA7P48741 367 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 CDH13P55290 713 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 FBXO48Q5FWF7 155 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 LRRC70Q7Z2Q7 622 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 CUZD1Q86UP6 607 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 C11orf74Q86VG3 221 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 ANKS4BQ8N8V4 417 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 RFWD2Q8NHY2 731 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 DNASE2BQ8WZ79 361 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 RMDN2Q96LZ7 410 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 NSUN5Q96P11 429 aaKnown RBP17.74■□□□□ 0.43
HMGN1-206ENST00000431390 MARCOQ9UEW3 520 aaPredicted RBP17.74■□□□□ 0.43
HMGN1-206ENST00000431390 ZDHHC2Q9UIJ5 367 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 PNMA8BQ9ULN7 279 aaPredicted RBP17.74■□□□□ 0.43
HMGN1-206ENST00000431390 ASF1AQ9Y294 204 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 ARL2BPQ9Y2Y0 163 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 PLEKHM1Q9Y4G2 1056 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 ASB1Q9Y576 335 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 K7EPI3 171 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 STK16O75716 305 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 RASGRP1O95267 797 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 CNR2P34972 360 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 SLC6A12P48065 614 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 PIK3CGP48736 1102 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 GTF2H2Q13888 395 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 FZD2Q14332 565 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 C18orf21Q32NC0 220 aaPredicted RBP17.74■□□□□ 0.43
HMGN1-206ENST00000431390 GTF2H2CQ6P1K8 395 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 WASH2PQ6VEQ5 465 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 DCUN1D3Q8IWE4 304 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 AFAP1L2Q8N4X5 818 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 SPDYE1Q8NFV5 336 aaPredicted RBP17.74■□□□□ 0.43
HMGN1-206ENST00000431390 C10orf82Q8WW14 230 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 ESAMQ96AP7 390 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 THOC1Q96FV9 657 aaKnown RBP17.74■□□□□ 0.43
HMGN1-206ENST00000431390 FAR2Q96K12 515 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 PLCD4Q9BRC7 762 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 HGH1Q9BTY7 390 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 ZBTB26Q9HCK0 441 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 WASH6PQ9NQA3 447 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 KCNK4Q9NYG8 393 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 OPTCQ9UBM4 332 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 VTI1BQ9UEU0 232 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 PSMD13Q9UNM6 376 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 SLCO1B1Q9Y6L6 691 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 USH1CQ9Y6N9 552 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 UBFD1O14562 309 aaKnown RBP17.73■□□□□ 0.43
HMGN1-206ENST00000431390 CCNT2O60583 730 aaKnown RBP17.73■□□□□ 0.43
HMGN1-206ENST00000431390 RPL10P27635 214 aaKnown RBP17.73■□□□□ 0.43
HMGN1-206ENST00000431390 BLKP51451 505 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 CTBSQ01459 385 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 EIF2B5Q13144 721 aaKnown RBP17.73■□□□□ 0.43
HMGN1-206ENST00000431390 UAP1L1Q3KQV9 507 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 WDR45BQ5MNZ6 344 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 SH2D4BQ5SQS7 431 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 CEP68Q76N32 757 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 RD3Q7Z3Z2 195 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 PARGQ86W56 976 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 HID1Q8IV36 788 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 KLHDC8AQ8IYD2 350 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 TMEFF1Q8IYR6 380 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 TBC1D21Q8IYX1 336 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 OR9A1PQ8NGU1 263 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 OR5K2Q8NHB8 316 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 C1orf216Q8TAB5 229 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 TRPC4APQ8TEL6 797 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 AGAP11Q8TF27 550 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 RAD51AP1Q96B01 352 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 SKA1Q96BD8 255 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 ZNF382Q96SR6 550 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 PKP4Q99569 1192 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 SHCBP1LQ9BZQ2 653 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 SLC32A1Q9H598 525 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 STN1Q9H668 368 aaKnown RBP17.73■□□□□ 0.43
HMGN1-206ENST00000431390 KCNK13Q9HB14 408 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 TM9SF3Q9HD45 589 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 SEMA4BQ9NPR2 832 aaPredicted RBP17.73■□□□□ 0.43
HMGN1-206ENST00000431390 STOX2Q9P2F5 926 aaPredicted RBP17.73■□□□□ 0.43
HMGN1-206ENST00000431390 DCTN4Q9UJW0 460 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 PCOLCE2Q9UKZ9 415 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 ST14Q9Y5Y6 855 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 THADAQ6YHU6 1953 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 SDK1Q7Z5N4 2213 aa17.73■□□□□ 0.43
HMGN1-206ENST00000431390 ABCA7Q8IZY2 2146 aa17.72■□□□□ 0.43
HMGN1-206ENST00000431390 A0A0G2JND7 137 aa17.72■□□□□ 0.43
HMGN1-206ENST00000431390 MATN2O00339 956 aa17.72■□□□□ 0.43
HMGN1-206ENST00000431390 WNT1P04628 370 aa17.72■□□□□ 0.43
HMGN1-206ENST00000431390 FGF4P08620 206 aa17.72■□□□□ 0.43
HMGN1-206ENST00000431390 TSPAN8P19075 237 aa17.72■□□□□ 0.43
HMGN1-206ENST00000431390 ARFIP2P53365 341 aa17.72■□□□□ 0.43
HMGN1-206ENST00000431390 PKNOX1P55347 436 aa17.72■□□□□ 0.43
HMGN1-206ENST00000431390 SH3BP2P78314 561 aa17.72■□□□□ 0.43
HMGN1-206ENST00000431390 SF3A3Q12874 501 aaKnown RBP eCLIP17.72■□□□□ 0.436e-7■□□□□ 11.3
HMGN1-206ENST00000431390 CCSMST1Q4G0I0 132 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms