RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 NCCRP1Q6ZVX7 275 aaPredicted RBP10.44□□□□□ -0.74
TCOF1-204ENST00000427724 CHSY3Q70JA7 882 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 FAM72BQ86X60 149 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 ZNF761Q86XN6 746 aaPredicted RBP10.44□□□□□ -0.74
TCOF1-204ENST00000427724 ZBTB2Q8N680 514 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 SIDT2Q8NBJ9 832 aaKnown RBP10.44□□□□□ -0.74
TCOF1-204ENST00000427724 BTBD9Q96Q07 612 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 OR2M4Q96R27 311 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 CCDC177Q9NQR7 707 aaPredicted RBP10.44□□□□□ -0.74
TCOF1-204ENST00000427724 COL4A5P29400 1685 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 BCAT2O15382 392 aaPredicted RBP10.44□□□□□ -0.74
TCOF1-204ENST00000427724 FYNP06241 537 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 PABPC4LP0CB38 370 aaKnown RBP10.44□□□□□ -0.74
TCOF1-204ENST00000427724 POLR2CP19387 275 aaPredicted RBP10.44□□□□□ -0.74
TCOF1-204ENST00000427724 JAK1P23458 1154 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 CD6P30203 668 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 NTSP30990 170 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 PREPP48147 710 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 CLK1P49759 484 aaKnown RBP10.44□□□□□ -0.74
TCOF1-204ENST00000427724 TRIM71Q2Q1W2 868 aaKnown RBP10.44□□□□□ -0.74
TCOF1-204ENST00000427724 MTX3Q5HYI7 312 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 METTL21CQ5VZV1 264 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 FSTL5Q8N475 847 aaPredicted RBP10.44□□□□□ -0.74
TCOF1-204ENST00000427724 OLIG1Q8TAK6 271 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 MAPK15Q8TD08 544 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 GATA6Q92908 595 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 PMEPA1Q969W9 287 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 GAL3ST4Q96RP7 486 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 NDC1Q9BTX1 674 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 TTLL2Q9BWV7 592 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 TMEM248Q9NWD8 314 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 HEBP2Q9Y5Z4 205 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 SPTAN1Q13813 2472 aaKnown RBP10.44□□□□□ -0.74
TCOF1-204ENST00000427724 A0A0G2JN53 185 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 DLL1O00548 723 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 SGTAO43765 313 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 PRAMEF11O60813 436 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 ULK1O75385 1050 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 SRPRAP08240 638 aaKnown RBP10.43□□□□□ -0.74
TCOF1-204ENST00000427724 HNRNPA2B1P22626 353 aaKnown RBP10.43□□□□□ -0.74
TCOF1-204ENST00000427724 NDUFS1P28331 727 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 PGGT1BP53609 377 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 FRG1Q14331 258 aaKnown RBP10.43□□□□□ -0.74
TCOF1-204ENST00000427724 DEFB133Q30KQ1 61 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 ATP13A5Q4VNC0 1218 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 PAGE2Q7Z2X7 111 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 HORMAD1Q86X24 394 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 DCBLD1Q8N8Z6 715 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 PHC3Q8NDX5 983 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 USP7Q93009 1102 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 CEP295NLQ96MC4 621 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 ASB16Q96NS5 453 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 MRPL57Q9BQC6 102 aaKnown RBP10.43□□□□□ -0.74
TCOF1-204ENST00000427724 GPATCH1Q9BRR8 931 aaKnown RBP10.43□□□□□ -0.74
TCOF1-204ENST00000427724 AARSD1Q9BTE6 412 aaKnown RBP10.43□□□□□ -0.74
TCOF1-204ENST00000427724 SPAG4Q9NPE6 437 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 TAF4O00268 1085 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 LATO43561 262 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 TIPRLO75663 272 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 ZNF30P17039 623 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 XRCC1P18887 633 aaPredicted RBP10.43□□□□□ -0.74
TCOF1-204ENST00000427724 AOC1P19801 751 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 ENTPD1P49961 510 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 TAS2R50P59544 299 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 SLC10A2Q12908 348 aaPredicted RBP10.43□□□□□ -0.74
TCOF1-204ENST00000427724 PCLAFQ15004 111 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 HNRNPA1L2Q32P51 320 aaKnown RBP10.43□□□□□ -0.74
TCOF1-204ENST00000427724 RSBN1Q5VWQ0 802 aaPredicted RBP10.43□□□□□ -0.74
TCOF1-204ENST00000427724 TRAF7Q6Q0C0 670 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 PIM3Q86V86 326 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 CPNE9Q8IYJ1 553 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 PLD6Q8N2A8 252 aaKnown RBP10.43□□□□□ -0.74
TCOF1-204ENST00000427724 SLC44A3Q8N4M1 653 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 AVL9Q8NBF6 648 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 TNIP2Q8NFZ5 429 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 DNAJB14Q8TBM8 379 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 C1QTNF1Q9BXJ1 281 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 NOL11Q9H8H0 719 aaKnown RBP10.43□□□□□ -0.74
TCOF1-204ENST00000427724 SERTAD3Q9UJW9 196 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 R4GN57 208 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 EVPLQ92817 2033 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 A0A087X1B8 175 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 A8MUA0 341 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 KMOO15229 486 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 ALDOAP04075 364 aaKnown RBP10.43□□□□□ -0.74
TCOF1-204ENST00000427724 PPP2R1BP30154 601 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 ETV4P43268 484 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 PLA2G16P53816 162 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 CDH15P55291 814 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 CYP4F3Q08477 520 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 TAF1AQ15573 450 aaPredicted RBP10.43□□□□□ -0.74
TCOF1-204ENST00000427724 TSTD2Q5T7W7 516 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 PDSS2Q86YH6 399 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 FBXO15Q8NCQ5 510 aaPredicted RBP10.43□□□□□ -0.74
TCOF1-204ENST00000427724 RIN3Q8TB24 985 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 C17orf50Q8WW18 174 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 RBM18Q96H35 190 aaKnown RBP10.43□□□□□ -0.74
TCOF1-204ENST00000427724 LRIG1Q96JA1 1093 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 RNF145Q96MT1 663 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 TGM7Q96PF1 710 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms