RNA–Protein interactions for RNA: ENST00000425967.7

FGFR1-211, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 5,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-211ENST00000425967 TPST2O60704 377 aa12.39□□□□□ -0.43
FGFR1-211ENST00000425967 ACP5P13686 325 aa12.39□□□□□ -0.43
FGFR1-211ENST00000425967 GDI1P31150 447 aa12.39□□□□□ -0.43
FGFR1-211ENST00000425967 IDH3AP50213 366 aa12.39□□□□□ -0.43
FGFR1-211ENST00000425967 VLDLRP98155 873 aa12.39□□□□□ -0.43
FGFR1-211ENST00000425967 SCN1BQ07699 218 aa12.39□□□□□ -0.43
FGFR1-211ENST00000425967 ARSIQ5FYB1 569 aa12.39□□□□□ -0.43
FGFR1-211ENST00000425967 SETD6Q8TBK2 473 aa12.39□□□□□ -0.43
FGFR1-211ENST00000425967 SHDQ96IW2 340 aa12.39□□□□□ -0.43
FGFR1-211ENST00000425967 PHF12Q96QT6 1004 aa12.39□□□□□ -0.43
FGFR1-211ENST00000425967 NODALQ96S42 347 aa12.39□□□□□ -0.43
FGFR1-211ENST00000425967 MTERF1Q99551 399 aaKnown RBP12.39□□□□□ -0.43
FGFR1-211ENST00000425967 TMEM175Q9BSA9 504 aa12.39□□□□□ -0.43
FGFR1-211ENST00000425967 ZSCAN5AQ9BUG6 496 aa12.39□□□□□ -0.43
FGFR1-211ENST00000425967 SIRPGQ9P1W8 387 aa12.39□□□□□ -0.43
FGFR1-211ENST00000425967 YIPF1Q9Y548 306 aa12.39□□□□□ -0.43
FGFR1-211ENST00000425967 FAM234BA2RU67 622 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 AGR2O95994 175 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 TNFP01375 233 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 ADH5P11766 374 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 POU2F1P14859 743 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 ACVR2AP27037 513 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 TIE1P35590 1138 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 DHPSP49366 369 aaPredicted RBP12.38□□□□□ -0.43
FGFR1-211ENST00000425967 ZNF460Q14592 562 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 LRRC73Q5JTD7 316 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 C6orf52Q5T4I8 152 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 P2RY8Q86VZ1 359 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 SIPA1Q96FS4 1042 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 C12orf42Q96LP6 360 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 ZNF726A6NNF4 738 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 CAPN14A8MX76 684 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 ARVCFO00192 962 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 CLCN4P51793 760 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 COQ8BQ96D53 544 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 NTPCRQ9BSD7 190 aaKnown RBP12.38□□□□□ -0.43
FGFR1-211ENST00000425967 TRMT61BQ9BVS5 477 aaKnown RBP12.38□□□□□ -0.43
FGFR1-211ENST00000425967 RNF121Q9H920 327 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 PNO1Q9NRX1 252 aaKnown RBP12.38□□□□□ -0.43
FGFR1-211ENST00000425967 SLC22A2O15244 555 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 AIREO43918 545 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 MT-ND1P03886 318 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 MLLT3P42568 568 aaPredicted RBP12.38□□□□□ -0.43
FGFR1-211ENST00000425967 RABGGTBP53611 331 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 HADHBP55084 474 aaKnown RBP12.38□□□□□ -0.43
FGFR1-211ENST00000425967 OC90Q02509 493 aaPredicted RBP12.38□□□□□ -0.43
FGFR1-211ENST00000425967 PUM1Q14671 1186 aaKnown RBP eCLIP12.38□□□□□ -0.43
FGFR1-211ENST00000425967 SOWAHAQ2M3V2 549 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 GFOD2Q3B7J2 385 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 BRAT1Q6PJG6 821 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 AMIGO1Q86WK6 493 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 UFD1Q92890 307 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 RGMAQ96B86 450 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 FANCFQ9NPI8 374 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 CLDND1Q9NY35 253 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 PEX16Q9Y5Y5 336 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 RB1P06400 928 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 ZNF280AP59817 542 aaPredicted RBP12.38□□□□□ -0.43
FGFR1-211ENST00000425967 TARDBPQ13148 414 aaKnown RBP eCLIP12.38□□□□□ -0.43
FGFR1-211ENST00000425967 LACTB2Q53H82 288 aaPredicted RBP12.38□□□□□ -0.43
FGFR1-211ENST00000425967 TNFAIP8L2Q6P589 184 aaPredicted RBP12.38□□□□□ -0.43
FGFR1-211ENST00000425967 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.38□□□□□ -0.43
FGFR1-211ENST00000425967 OXR1Q8N573 874 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 CELF5Q8N6W0 485 aaKnown RBP12.38□□□□□ -0.43
FGFR1-211ENST00000425967 OR2L3Q8NG85 312 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 RIOK2Q9BVS4 552 aaKnown RBP12.38□□□□□ -0.43
FGFR1-211ENST00000425967 TTYH3Q9C0H2 523 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 XPNPEP1Q9NQW7 623 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 TBC1D24Q9ULP9 559 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 TLL2Q9Y6L7 1015 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 SRPRAP08240 638 aaKnown RBP12.38□□□□□ -0.43
FGFR1-211ENST00000425967 PIM1P11309 404 aaPredicted RBP12.38□□□□□ -0.43
FGFR1-211ENST00000425967 PRPS1L1P21108 318 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 PRKCHP24723 683 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 RPS24P62847 133 aaKnown RBP12.38□□□□□ -0.43
FGFR1-211ENST00000425967 SLC10A7Q0GE19 358 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 CLEC20AQ6ZU45 233 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 CAMKVQ8NCB2 501 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 ESAMQ96AP7 390 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 LGR4Q9BXB1 951 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 TBC1D17Q9HA65 648 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 ZCCHC3Q9NUD5 404 aaKnown RBP12.38□□□□□ -0.43
FGFR1-211ENST00000425967 TVP23BQ9NYZ1 205 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 CNTN3Q9P232 1028 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 FNIP2Q9P278 1114 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 PFDN2Q9UHV9 154 aa12.38□□□□□ -0.43
FGFR1-211ENST00000425967 DAPL1A0PJW8 107 aa12.37□□□□□ -0.43
FGFR1-211ENST00000425967 CPED1A4D0V7 1026 aa12.37□□□□□ -0.43
FGFR1-211ENST00000425967 B4DGG1 531 aa12.37□□□□□ -0.43
FGFR1-211ENST00000425967 ABLIM1O14639 778 aa12.37□□□□□ -0.43
FGFR1-211ENST00000425967 TPD52L2O43399 206 aaKnown RBP12.37□□□□□ -0.43
FGFR1-211ENST00000425967 CHRNB2P17787 502 aa12.37□□□□□ -0.43
FGFR1-211ENST00000425967 EFNA1P20827 205 aaPredicted RBP12.37□□□□□ -0.43
FGFR1-211ENST00000425967 CXCR1P25024 350 aa12.37□□□□□ -0.43
FGFR1-211ENST00000425967 TLE2Q04725 743 aa12.37□□□□□ -0.43
FGFR1-211ENST00000425967 TOR1AIP1Q5JTV8 583 aa12.37□□□□□ -0.43
FGFR1-211ENST00000425967 CNKSR3Q6P9H4 555 aa12.37□□□□□ -0.43
FGFR1-211ENST00000425967 KCT2Q8NC54 265 aa12.37□□□□□ -0.43
FGFR1-211ENST00000425967 FAM110BQ8TC76 370 aa12.37□□□□□ -0.43
FGFR1-211ENST00000425967 MED28Q9H204 178 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms