RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 SLC16A5O15375 505 aa23.73■■□□□ 1.39
VEGFA-209ENST00000425836 THRAP10827 490 aa23.73■■□□□ 1.39
VEGFA-209ENST00000425836 MAP4P27816 1152 aaKnown RBP23.73■■□□□ 1.39
VEGFA-209ENST00000425836 CSRP3P50461 194 aa23.73■■□□□ 1.39
VEGFA-209ENST00000425836 ADGRD1Q6QNK2 874 aa23.73■■□□□ 1.39
VEGFA-209ENST00000425836 RAPH1Q70E73 1250 aa23.73■■□□□ 1.39
VEGFA-209ENST00000425836 LMNTD1Q8N9Z9 388 aa23.73■■□□□ 1.39
VEGFA-209ENST00000425836 DENND1AQ8TEH3 1009 aa23.73■■□□□ 1.39
VEGFA-209ENST00000425836 GRAMD1AQ96CP6 724 aa23.73■■□□□ 1.39
VEGFA-209ENST00000425836 CCDC74BQ96LY2 380 aa23.73■■□□□ 1.39
VEGFA-209ENST00000425836 PKP4Q99569 1192 aa23.73■■□□□ 1.39
VEGFA-209ENST00000425836 TWSG1Q9GZX9 223 aa23.73■■□□□ 1.39
VEGFA-209ENST00000425836 KLHL3Q9UH77 587 aa23.73■■□□□ 1.39
VEGFA-209ENST00000425836 KRT38O76015 456 aa23.72■■□□□ 1.39
VEGFA-209ENST00000425836 SLC35E2BP0CK96 405 aa23.72■■□□□ 1.39
VEGFA-209ENST00000425836 GMPRP36959 345 aa23.72■■□□□ 1.39
VEGFA-209ENST00000425836 PRKAA1Q13131 559 aa23.72■■□□□ 1.39
VEGFA-209ENST00000425836 SP140Q13342 867 aa23.72■■□□□ 1.39
VEGFA-209ENST00000425836 SNAP47Q5SQN1 464 aa23.72■■□□□ 1.39
VEGFA-209ENST00000425836 PHF19Q5T6S3 580 aa23.72■■□□□ 1.39
VEGFA-209ENST00000425836 ARMC6Q6NXE6 501 aa23.72■■□□□ 1.39
VEGFA-209ENST00000425836 TAOK1Q7L7X3 1001 aa23.72■■□□□ 1.39
VEGFA-209ENST00000425836 SPATA6LQ8N4H0 392 aa23.72■■□□□ 1.39
VEGFA-209ENST00000425836 LINC01555Q8NAE3 123 aa23.72■■□□□ 1.39
VEGFA-209ENST00000425836 ANKRD7Q92527 254 aa23.72■■□□□ 1.39
VEGFA-209ENST00000425836 PARVBQ9HBI1 364 aa23.72■■□□□ 1.39
VEGFA-209ENST00000425836 SNX15Q9NRS6 342 aa23.72■■□□□ 1.39
VEGFA-209ENST00000425836 PDE10AQ9Y233 779 aa23.72■■□□□ 1.39
VEGFA-209ENST00000425836 TMX2-CTNND1H3BSU7 103 aa23.71■■□□□ 1.39
VEGFA-209ENST00000425836 ALDOAP04075 364 aaKnown RBP23.71■■□□□ 1.39
VEGFA-209ENST00000425836 CHRM5P08912 532 aaPredicted RBP23.71■■□□□ 1.39
VEGFA-209ENST00000425836 CCDC166P0CW27 439 aa23.71■■□□□ 1.39
VEGFA-209ENST00000425836 CNTFP26441 200 aa23.71■■□□□ 1.39
VEGFA-209ENST00000425836 TRA2AQ13595 282 aaKnown RBP eCLIP23.71■■□□□ 1.391e-8■■□□□ 12.8
VEGFA-209ENST00000425836 FAM92BQ6ZTR7 304 aa23.71■■□□□ 1.39
VEGFA-209ENST00000425836 RCBTB1Q8NDN9 531 aa23.71■■□□□ 1.39
VEGFA-209ENST00000425836 OR2L8Q8NGY9 312 aa23.71■■□□□ 1.39
VEGFA-209ENST00000425836 UBXN10Q96LJ8 280 aa23.71■■□□□ 1.39
VEGFA-209ENST00000425836 DERL2Q9GZP9 239 aa23.71■■□□□ 1.39
VEGFA-209ENST00000425836 SPHK1Q9NYA1 384 aa23.71■■□□□ 1.39
VEGFA-209ENST00000425836 SPATA7Q9P0W8 599 aa23.71■■□□□ 1.39
VEGFA-209ENST00000425836 SPTBN2O15020 2390 aa23.71■■□□□ 1.39
VEGFA-209ENST00000425836 COL27A1Q8IZC6 1860 aaPredicted RBP23.7■■□□□ 1.39
VEGFA-209ENST00000425836 GSAPA4D1B5 854 aa23.7■■□□□ 1.38
VEGFA-209ENST00000425836 A8MU76 341 aa23.7■■□□□ 1.38
VEGFA-209ENST00000425836 CDC7O00311 574 aa23.7■■□□□ 1.38
VEGFA-209ENST00000425836 KIF1CO43896 1103 aaKnown RBP23.7■■□□□ 1.38
VEGFA-209ENST00000425836 CYP2A7P20853 494 aa23.7■■□□□ 1.38
VEGFA-209ENST00000425836 SERPINB8P50452 374 aa23.7■■□□□ 1.38
VEGFA-209ENST00000425836 KPNA2P52292 529 aaKnown RBP23.7■■□□□ 1.38
VEGFA-209ENST00000425836 PHKG1Q16816 387 aa23.7■■□□□ 1.38
VEGFA-209ENST00000425836 ARHGAP22Q7Z5H3 698 aa23.7■■□□□ 1.38
VEGFA-209ENST00000425836 C2orf73Q8N5S3 287 aaPredicted RBP23.7■■□□□ 1.38
VEGFA-209ENST00000425836 MCOLN3Q8TDD5 553 aa23.7■■□□□ 1.38
VEGFA-209ENST00000425836 RAB11FIP5Q9BXF6 653 aa23.7■■□□□ 1.38
VEGFA-209ENST00000425836 UNKQ9C0B0 810 aaKnown RBP23.7■■□□□ 1.38
VEGFA-209ENST00000425836 ACTR10Q9NZ32 417 aa23.7■■□□□ 1.38
VEGFA-209ENST00000425836 LNPEPQ9UIQ6 1025 aa23.7■■□□□ 1.38
VEGFA-209ENST00000425836 NEUROG3Q9Y4Z2 214 aa23.7■■□□□ 1.38
VEGFA-209ENST00000425836 PIPSLA2A3N6 862 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 TRIM49D1C9J1S8 452 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 MATN2O00339 956 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 SYF2O95926 243 aaKnown RBP23.69■■□□□ 1.38
VEGFA-209ENST00000425836 C2P06681 752 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 SNRPAP09012 282 aaKnown RBP23.69■■□□□ 1.38
VEGFA-209ENST00000425836 TYK2P29597 1187 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 CAMK2BQ13554 666 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 CYP2A13Q16696 494 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 RAB42Q8N4Z0 105 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 MREGQ8N565 214 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 HMGCLL1Q8TB92 370 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 ISL2Q96A47 359 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 STRADBQ9C0K7 418 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 POMT2Q9UKY4 750 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 NPEPPSL1A6NEC2 478 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 C2orf74A8MZ97 194 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 KRT37O76014 449 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 SLC16A8O95907 504 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 ERGP11308 486 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 CD1DP15813 335 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 PRDX3P30048 256 aaKnown RBP23.69■■□□□ 1.38
VEGFA-209ENST00000425836 PEBP1P30086 187 aaKnown RBP23.69■■□□□ 1.38
VEGFA-209ENST00000425836 MAGEA12P43365 314 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 CSHL1Q14406 222 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 C16orf72Q14CZ0 275 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 LGSNQ5TDP6 509 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 ANKS6Q68DC2 871 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 SBSNQ6UWP8 590 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 LIN37Q96GY3 246 aaPredicted RBP23.69■■□□□ 1.38
VEGFA-209ENST00000425836 PPM1MQ96MI6 270 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 CD180Q99467 661 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 MAP3K3Q99759 626 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.69■■□□□ 1.38
VEGFA-209ENST00000425836 PSMC3IPQ9P2W1 217 aaPredicted RBP23.69■■□□□ 1.38
VEGFA-209ENST00000425836 CTNNAL1Q9UBT7 734 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 TLK1Q9UKI8 766 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 ACOT9Q9Y305 439 aa23.69■■□□□ 1.38
VEGFA-209ENST00000425836 TOX3O15405 576 aaPredicted RBP23.68■■□□□ 1.38
VEGFA-209ENST00000425836 NUDT17P0C025 328 aa23.68■■□□□ 1.38
VEGFA-209ENST00000425836 SLC26A3P40879 764 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms