RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 HLA-FP30511 346 aa3.66□□□□□ -1.82
LINC01040-201ENST00000425048 TNIP1Q15025 636 aa3.66□□□□□ -1.82
LINC01040-201ENST00000425048 TBCEQ15813 527 aaPredicted RBP3.66□□□□□ -1.82
LINC01040-201ENST00000425048 ITPRIPL2Q3MIP1 535 aa3.66□□□□□ -1.82
LINC01040-201ENST00000425048 GKAP1Q5VSY0 366 aaPredicted RBP3.66□□□□□ -1.82
LINC01040-201ENST00000425048 TMEM207Q6UWW9 146 aa3.66□□□□□ -1.82
LINC01040-201ENST00000425048 FAM114A1Q8IWE2 563 aa3.66□□□□□ -1.82
LINC01040-201ENST00000425048 GPD1LQ8N335 351 aa3.66□□□□□ -1.82
LINC01040-201ENST00000425048 METTL4Q8N3J2 472 aa3.66□□□□□ -1.82
LINC01040-201ENST00000425048 POMGNT1Q8WZA1 660 aa3.66□□□□□ -1.82
LINC01040-201ENST00000425048 OR6C1Q96RD1 312 aa3.66□□□□□ -1.82
LINC01040-201ENST00000425048 C16orf70Q9BSU1 422 aa3.66□□□□□ -1.82
LINC01040-201ENST00000425048 JMJD4Q9H9V9 463 aa3.66□□□□□ -1.82
LINC01040-201ENST00000425048 P4HTMQ9NXG6 502 aa3.66□□□□□ -1.82
LINC01040-201ENST00000425048 RHCGQ9UBD6 479 aa3.66□□□□□ -1.82
LINC01040-201ENST00000425048 A0A1W2PR80 420 aa3.65□□□□□ -1.83
LINC01040-201ENST00000425048 HYKKA2RU49 373 aa3.65□□□□□ -1.83
LINC01040-201ENST00000425048 GLRA3O75311 464 aa3.65□□□□□ -1.83
LINC01040-201ENST00000425048 CDK2AP2O75956 126 aa3.65□□□□□ -1.83
LINC01040-201ENST00000425048 SEC24AO95486 1093 aa3.65□□□□□ -1.83
LINC01040-201ENST00000425048 IGHEP01854 428 aa3.65□□□□□ -1.83
LINC01040-201ENST00000425048 HOXD4P09016 255 aaPredicted RBP3.65□□□□□ -1.83
LINC01040-201ENST00000425048 HSPA1AP0DMV8 641 aaKnown RBP3.65□□□□□ -1.83
LINC01040-201ENST00000425048 HSPA1BP0DMV9 641 aaKnown RBP3.65□□□□□ -1.83
LINC01040-201ENST00000425048 CAPGP40121 348 aa3.65□□□□□ -1.83
LINC01040-201ENST00000425048 RPL21P46778 160 aaKnown RBP3.65□□□□□ -1.83
LINC01040-201ENST00000425048 CAMPP49913 170 aa3.65□□□□□ -1.83
LINC01040-201ENST00000425048 IKQ13123 557 aaPredicted RBP3.65□□□□□ -1.83
LINC01040-201ENST00000425048 SLC25A53Q5H9E4 307 aa3.65□□□□□ -1.83
LINC01040-201ENST00000425048 CPLX4Q7Z7G2 160 aa3.65□□□□□ -1.83
LINC01040-201ENST00000425048 SCYL3Q8IZE3 742 aa3.65□□□□□ -1.83
LINC01040-201ENST00000425048 BTBD10Q9BSF8 475 aa3.65□□□□□ -1.83
LINC01040-201ENST00000425048 FAM49AQ9H0Q0 323 aaPredicted RBP3.65□□□□□ -1.83
LINC01040-201ENST00000425048 HEXA-AS1Q9H8Q6 139 aa3.65□□□□□ -1.83
LINC01040-201ENST00000425048 CHMP1AQ9HD42 196 aaPredicted RBP3.65□□□□□ -1.83
LINC01040-201ENST00000425048 CTSZQ9UBR2 303 aa3.65□□□□□ -1.83
LINC01040-201ENST00000425048 ZNF510Q9Y2H8 683 aa3.65□□□□□ -1.83
LINC01040-201ENST00000425048 LIPT2A6NK58 231 aa3.64□□□□□ -1.83
LINC01040-201ENST00000425048 PI4K2BG5E9Z4 385 aa3.64□□□□□ -1.83
LINC01040-201ENST00000425048 RSL1D1O76021 490 aaKnown RBP3.64□□□□□ -1.83
LINC01040-201ENST00000425048 BCL3P20749 454 aa3.64□□□□□ -1.83
LINC01040-201ENST00000425048 DEKP35659 375 aaKnown RBP3.64□□□□□ -1.83
LINC01040-201ENST00000425048 CCR9P51686 369 aa3.64□□□□□ -1.83
LINC01040-201ENST00000425048 PRAMEP78395 509 aa3.64□□□□□ -1.83
LINC01040-201ENST00000425048 GUCY2DQ02846 1103 aa3.64□□□□□ -1.83
LINC01040-201ENST00000425048 LCN1P1Q5VSP4 162 aa3.64□□□□□ -1.83
LINC01040-201ENST00000425048 FRRS1Q6ZNA5 592 aa3.64□□□□□ -1.83
LINC01040-201ENST00000425048 INTS8Q75QN2 995 aaKnown RBP3.64□□□□□ -1.83
LINC01040-201ENST00000425048 MCEMP1Q8IX19 187 aa3.64□□□□□ -1.83
LINC01040-201ENST00000425048 TEX11Q8IYF3 940 aa3.64□□□□□ -1.83
LINC01040-201ENST00000425048 OR13C3Q8NGS6 347 aa3.64□□□□□ -1.83
LINC01040-201ENST00000425048 OR52N5Q8NH56 324 aa3.64□□□□□ -1.83
LINC01040-201ENST00000425048 CHPT1Q8WUD6 406 aa3.64□□□□□ -1.83
LINC01040-201ENST00000425048 C1orf147Q96MC9 270 aaPredicted RBP3.64□□□□□ -1.83
LINC01040-201ENST00000425048 NKX3-1Q99801 234 aaPredicted RBP3.64□□□□□ -1.83
LINC01040-201ENST00000425048 URM1Q9BTM9 101 aaKnown RBP3.64□□□□□ -1.83
LINC01040-201ENST00000425048 OR2B2Q9GZK3 357 aa3.64□□□□□ -1.83
LINC01040-201ENST00000425048 LUZP4Q9P127 313 aa3.64□□□□□ -1.83
LINC01040-201ENST00000425048 PDP2Q9P2J9 529 aa3.64□□□□□ -1.83
LINC01040-201ENST00000425048 ZNF107Q9UII5 783 aaPredicted RBP3.64□□□□□ -1.83
LINC01040-201ENST00000425048 CRYL1Q9Y2S2 319 aa3.64□□□□□ -1.83
LINC01040-201ENST00000425048 TFECO14948 347 aaPredicted RBP3.63□□□□□ -1.83
LINC01040-201ENST00000425048 SLC2A2P11168 524 aaPredicted RBP3.63□□□□□ -1.83
LINC01040-201ENST00000425048 PSMA4P25789 261 aaKnown RBP3.63□□□□□ -1.83
LINC01040-201ENST00000425048 KRT33BQ14525 404 aa3.63□□□□□ -1.83
LINC01040-201ENST00000425048 XKR3Q5GH77 459 aa3.63□□□□□ -1.83
LINC01040-201ENST00000425048 VITQ6UXI7 678 aa3.63□□□□□ -1.83
LINC01040-201ENST00000425048 ZNF841Q6ZN19 808 aa3.63□□□□□ -1.83
LINC01040-201ENST00000425048 CEACAM19Q7Z692 300 aa3.63□□□□□ -1.83
LINC01040-201ENST00000425048 SLC25A42Q86VD7 318 aa3.63□□□□□ -1.83
LINC01040-201ENST00000425048 MYRIPQ8NFW9 859 aa3.63□□□□□ -1.83
LINC01040-201ENST00000425048 OR1L3Q8NH93 324 aa3.63□□□□□ -1.83
LINC01040-201ENST00000425048 MOSPD2Q8NHP6 518 aa3.63□□□□□ -1.83
LINC01040-201ENST00000425048 GATAD1Q8WUU5 269 aa3.63□□□□□ -1.83
LINC01040-201ENST00000425048 CNOT6LQ96LI5 555 aaKnown RBP3.63□□□□□ -1.83
LINC01040-201ENST00000425048 ZNF577Q9BSK1 485 aa3.63□□□□□ -1.83
LINC01040-201ENST00000425048 SH2D4AQ9H788 454 aa3.63□□□□□ -1.83
LINC01040-201ENST00000425048 B3GAT2Q9NPZ5 323 aa3.63□□□□□ -1.83
LINC01040-201ENST00000425048 SAGE1Q9NXZ1 904 aa3.63□□□□□ -1.83
LINC01040-201ENST00000425048 TAS2R14Q9NYV8 317 aa3.63□□□□□ -1.83
LINC01040-201ENST00000425048 TNNQ9UQP3 1299 aa3.63□□□□□ -1.83
LINC01040-201ENST00000425048 ZBTB25P24278 435 aa3.62□□□□□ -1.83
LINC01040-201ENST00000425048 CSNK2BP67870 215 aa3.62□□□□□ -1.83
LINC01040-201ENST00000425048 POU5F1Q01860 360 aaKnown RBP3.62□□□□□ -1.83
LINC01040-201ENST00000425048 CD300CQ08708 224 aa3.62□□□□□ -1.83
LINC01040-201ENST00000425048 CAPRIN1Q14444 709 aaKnown RBP3.62□□□□□ -1.83
LINC01040-201ENST00000425048 MTF1Q14872 753 aa3.62□□□□□ -1.83
LINC01040-201ENST00000425048 ASTE1Q2TB18 679 aaPredicted RBP3.62□□□□□ -1.83
LINC01040-201ENST00000425048 FAM98BQ52LJ0 330 aaKnown RBP3.62□□□□□ -1.83
LINC01040-201ENST00000425048 PHLDA2Q53GA4 152 aa3.62□□□□□ -1.83
LINC01040-201ENST00000425048 NOTUMQ6P988 496 aa3.62□□□□□ -1.83
LINC01040-201ENST00000425048 Q6ZVH6 145 aa3.62□□□□□ -1.83
LINC01040-201ENST00000425048 ADCK1Q86TW2 530 aa3.62□□□□□ -1.83
LINC01040-201ENST00000425048 CFAP206Q8IYR0 622 aa3.62□□□□□ -1.83
LINC01040-201ENST00000425048 CDK20Q8IZL9 346 aa3.62□□□□□ -1.83
LINC01040-201ENST00000425048 PDILTQ8N807 584 aa3.62□□□□□ -1.83
LINC01040-201ENST00000425048 OR5M8Q8NGP6 311 aa3.62□□□□□ -1.83
LINC01040-201ENST00000425048 NPRL2Q8WTW4 380 aa3.62□□□□□ -1.83
LINC01040-201ENST00000425048 PSMB7Q99436 277 aa3.62□□□□□ -1.83
LINC01040-201ENST00000425048 SHARPINQ9H0F6 387 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms