RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 ZIC1Q15915 447 aa16.75■□□□□ 0.27
MSH6-203ENST00000420813 SEL1L2Q5TEA6 688 aa16.75■□□□□ 0.27
MSH6-203ENST00000420813 FAM69BQ5VUD6 431 aa16.75■□□□□ 0.27
MSH6-203ENST00000420813 TLDC1Q6P9B6 456 aa16.75■□□□□ 0.27
MSH6-203ENST00000420813 PPP1R21Q6ZMI0 780 aa16.75■□□□□ 0.27
MSH6-203ENST00000420813 SLC22A15Q8IZD6 547 aa16.75■□□□□ 0.27
MSH6-203ENST00000420813 OR4L1Q8NH43 312 aa16.75■□□□□ 0.27
MSH6-203ENST00000420813 GBP5Q96PP8 586 aa16.75■□□□□ 0.27
MSH6-203ENST00000420813 TSSK1BQ9BXA7 367 aa16.75■□□□□ 0.27
MSH6-203ENST00000420813 GPR83Q9NYM4 423 aa16.75■□□□□ 0.27
MSH6-203ENST00000420813 IMPACTQ9P2X3 320 aa16.75■□□□□ 0.27
MSH6-203ENST00000420813 MAP4K5Q9Y4K4 846 aa16.75■□□□□ 0.27
MSH6-203ENST00000420813 HIVEP3Q5T1R4 2406 aa16.75■□□□□ 0.27
MSH6-203ENST00000420813 DOCK10Q96BY6 2186 aa16.74■□□□□ 0.27
MSH6-203ENST00000420813 E7EVH7 732 aa16.74■□□□□ 0.27
MSH6-203ENST00000420813 ZNF185O15231 689 aa16.74■□□□□ 0.27
MSH6-203ENST00000420813 ZSCAN9O15535 394 aaPredicted RBP16.74■□□□□ 0.27
MSH6-203ENST00000420813 OR1I1O60431 355 aa16.74■□□□□ 0.27
MSH6-203ENST00000420813 CBSLP0DN79 551 aa16.74■□□□□ 0.27
MSH6-203ENST00000420813 PKLRP30613 574 aa16.74■□□□□ 0.27
MSH6-203ENST00000420813 CBSP35520 551 aa16.74■□□□□ 0.27
MSH6-203ENST00000420813 RAB28P51157 221 aa16.74■□□□□ 0.27
MSH6-203ENST00000420813 ATP1A4Q13733 1029 aa16.74■□□□□ 0.27
MSH6-203ENST00000420813 SSPNQ14714 243 aa16.74■□□□□ 0.27
MSH6-203ENST00000420813 DEFB110Q30KQ9 67 aa16.74■□□□□ 0.27
MSH6-203ENST00000420813 NAPRTQ6XQN6 538 aa16.74■□□□□ 0.27
MSH6-203ENST00000420813 ZNF534Q76KX8 674 aa16.74■□□□□ 0.27
MSH6-203ENST00000420813 SMAD5Q99717 465 aaKnown RBP16.74■□□□□ 0.27
MSH6-203ENST00000420813 NUDT9Q9BW91 350 aa16.74■□□□□ 0.27
MSH6-203ENST00000420813 AP1M1Q9BXS5 423 aa16.74■□□□□ 0.27
MSH6-203ENST00000420813 CASS4Q9NQ75 786 aa16.74■□□□□ 0.27
MSH6-203ENST00000420813 SLC2A6Q9UGQ3 507 aa16.74■□□□□ 0.27
MSH6-203ENST00000420813 ZNF148Q9UQR1 794 aa16.74■□□□□ 0.27
MSH6-203ENST00000420813 TCAF1Q9Y4C2 921 aa16.74■□□□□ 0.27
MSH6-203ENST00000420813 ISM1B1AKI9 464 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 HCRTR1O43613 425 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 GPC4O75487 556 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 IFNB1P01574 187 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 IGHEP01854 428 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 RPN2P04844 631 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 VARSP26640 1264 aaKnown RBP16.73■□□□□ 0.27
MSH6-203ENST00000420813 PEBP1P30086 187 aaKnown RBP16.73■□□□□ 0.27
MSH6-203ENST00000420813 CCR7P32248 378 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 GRIA1P42261 906 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 PRAMEP78395 509 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 DCDP81605 110 aaKnown RBP16.73■□□□□ 0.27
MSH6-203ENST00000420813 KYNUQ16719 465 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 FASTKD1Q53R41 847 aaKnown RBP16.73■□□□□ 0.27
MSH6-203ENST00000420813 AARS2Q5JTZ9 985 aaKnown RBP16.73■□□□□ 0.27
MSH6-203ENST00000420813 MLIPQ5VWP3 458 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 JMJD6Q6NYC1 403 aaPredicted RBP16.73■□□□□ 0.27
MSH6-203ENST00000420813 MRGPREQ86SM8 312 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 SLC13A5Q86YT5 568 aaPredicted RBP16.73■□□□□ 0.27
MSH6-203ENST00000420813 DNAJC22Q8N4W6 341 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 OR6P1Q8NGX9 317 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 ASZ1Q8WWH4 475 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 FER1L6-AS2Q96M78 137 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 ZNF778Q96MU6 729 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 PSMG3-AS1Q96PY0 264 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 CARD6Q9BX69 1037 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 SPRTNQ9H040 489 aaPredicted RBP16.73■□□□□ 0.27
MSH6-203ENST00000420813 RAB6BQ9NRW1 208 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 TXLNGQ9NUQ3 528 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 C5AR2Q9P296 337 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 NDOR1Q9UHB4 597 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 GPN3Q9UHW5 284 aaPredicted RBP16.73■□□□□ 0.27
MSH6-203ENST00000420813 PLAGL1Q9UM63 463 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 PLCL2Q9UPR0 1127 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 CDYLQ9Y232 598 aa16.73■□□□□ 0.27
MSH6-203ENST00000420813 CDC25BP30305 580 aa16.72■□□□□ 0.27
MSH6-203ENST00000420813 OTX2P32243 289 aa16.72■□□□□ 0.27
MSH6-203ENST00000420813 FOLR3P41439 243 aa16.72■□□□□ 0.27
MSH6-203ENST00000420813 UQCRFS1P47985 274 aa16.72■□□□□ 0.27
MSH6-203ENST00000420813 HSPA14Q0VDF9 509 aa16.72■□□□□ 0.27
MSH6-203ENST00000420813 VWA5B1Q5TIE3 1220 aa16.72■□□□□ 0.27
MSH6-203ENST00000420813 UNC5DQ6UXZ4 953 aa16.72■□□□□ 0.27
MSH6-203ENST00000420813 DCUN1D3Q8IWE4 304 aa16.72■□□□□ 0.27
MSH6-203ENST00000420813 Q8NA96 180 aa16.72■□□□□ 0.27
MSH6-203ENST00000420813 OR2Y1Q8NGV0 311 aa16.72■□□□□ 0.27
MSH6-203ENST00000420813 PNPLA2Q96AD5 504 aa16.72■□□□□ 0.27
MSH6-203ENST00000420813 SLC22A18Q96BI1 424 aa16.72■□□□□ 0.27
MSH6-203ENST00000420813 NDC1Q9BTX1 674 aa16.72■□□□□ 0.27
MSH6-203ENST00000420813 MENTQ9BUN1 341 aa16.72■□□□□ 0.27
MSH6-203ENST00000420813 TSGA10Q9BZW7 698 aa16.72■□□□□ 0.27
MSH6-203ENST00000420813 PAK5Q9P286 719 aa16.72■□□□□ 0.27
MSH6-203ENST00000420813 IFT80Q9P2H3 777 aaPredicted RBP16.72■□□□□ 0.27
MSH6-203ENST00000420813 PTRH2Q9Y3E5 179 aaKnown RBP16.72■□□□□ 0.27
MSH6-203ENST00000420813 A6NL46 340 aa16.71■□□□□ 0.27
MSH6-203ENST00000420813 KLHL41O60662 606 aa16.71■□□□□ 0.27
MSH6-203ENST00000420813 S1PR4O95977 384 aa16.71■□□□□ 0.27
MSH6-203ENST00000420813 APOA4P06727 396 aa16.71■□□□□ 0.27
MSH6-203ENST00000420813 APRTP07741 180 aa16.71■□□□□ 0.27
MSH6-203ENST00000420813 CD9P21926 228 aa16.71■□□□□ 0.27
MSH6-203ENST00000420813 GNLYP22749 145 aa16.71■□□□□ 0.27
MSH6-203ENST00000420813 TTPAP49638 278 aa16.71■□□□□ 0.27
MSH6-203ENST00000420813 CSE1LP55060 971 aaKnown RBP16.71■□□□□ 0.27
MSH6-203ENST00000420813 SEMA3AQ14563 771 aa16.71■□□□□ 0.27
MSH6-203ENST00000420813 INPP5JQ15735 1006 aaPredicted RBP16.71■□□□□ 0.27
MSH6-203ENST00000420813 NKAIN1Q4KMZ8 207 aa16.71■□□□□ 0.27
MSH6-203ENST00000420813 C1orf189Q5VU69 101 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms