RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 HSPA4LO95757 839 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 F3P13726 295 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 SLC2A4P14672 509 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 ZXDCQ2QGD7 858 aaPredicted RBP13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 PLK5Q496M5 336 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 SPATA21Q7Z572 469 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 RABEPKQ7Z6M1 372 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 SPATS2Q86XZ4 545 aaKnown RBP13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 LRRC56Q8IYG6 542 aaPredicted RBP13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 TMEFF1Q8IYR6 380 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 PHACTR4Q8IZ21 702 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 CCNYL1Q8N7R7 359 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 ZNF473Q8WTR7 871 aaKnown RBP13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 SNX19Q92543 992 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 INSM2Q96T92 566 aaPredicted RBP13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 PKP4Q99569 1192 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 RAB11FIP5Q9BXF6 653 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 WWP1Q9H0M0 922 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 TMEM168Q9H0V1 697 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 KIR3DX1Q9H7L2 352 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 ZBTB26Q9HCK0 441 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 KCNK4Q9NYG8 393 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 UTP6Q9NYH9 597 aaKnown RBP13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 GPRC5BQ9NZH0 403 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 STOX2Q9P2F5 926 aaPredicted RBP13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 KLF15Q9UIH9 416 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 ASF1AQ9Y294 204 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 DNAJC16Q9Y2G8 782 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 WDR37Q9Y2I8 494 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 SLCO1B1Q9Y6L6 691 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 COLEC10Q9Y6Z7 277 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 DCHS1Q96JQ0 3298 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 DOCK9Q9BZ29 2069 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 KIR2DS5A0A0G2JLQ3 304 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 A0A0G2JNG1 304 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 KIR2DS3K7RE56 304 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 UBFD1O14562 309 aaKnown RBP13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 ZNF195O14628 629 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 HRO43593 1189 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 SLC16A8O95907 504 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 OTCP00480 354 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 CHRNGP07510 517 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 MTHFD1P11586 935 aaKnown RBP13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 GNSP15586 552 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 XRCC1P18887 633 aaPredicted RBP13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 IMPA1P29218 277 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 HALP42357 657 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 CASP2P42575 452 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 RXRGP48443 463 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 AGTR2P50052 363 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 SIM2Q14190 667 aaPredicted RBP13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 KIR2DS5Q14953 304 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 CLCA4Q14CN2 919 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 TEAD4Q15561 434 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 RPE65Q16518 533 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 PLA2G4EQ3MJ16 856 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 GGTA1PQ4G0N0 100 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 LYSMD4Q5XG99 296 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 IYDQ6PHW0 289 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 FAM47EQ6ZV65 393 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 CUZD1Q86UP6 607 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 RBM12BQ8IXT5 1001 aaKnown RBP13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 CLYBLQ8N0X4 340 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 AVL9Q8NBF6 648 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 SPDYE1Q8NFV5 336 aaPredicted RBP13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 AGAP11Q8TF27 550 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 SETD7Q8WTS6 366 aaKnown RBP13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 EGFL8Q99944 293 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 SGPP1Q9BX95 441 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 WWOXQ9NZC7 414 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 OPTCQ9UBM4 332 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 TBC1D29Q9UFV1 150 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 PILRBQ9UKJ0 227 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 KCNK6Q9Y257 313 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 INVSQ9Y283 1065 aa13.86□□□□□ -0.19
SHMT1P1-201ENST00000419974 NCF1BA6NI72 391 aaPredicted RBP13.85□□□□□ -0.19
SHMT1P1-201ENST00000419974 NCF1CA8MVU1 366 aaPredicted RBP13.85□□□□□ -0.19
SHMT1P1-201ENST00000419974 HDAC3O15379 428 aa13.85□□□□□ -0.19
SHMT1P1-201ENST00000419974 LYPLA1O75608 230 aaPredicted RBP13.85□□□□□ -0.19
SHMT1P1-201ENST00000419974 GUCA1CO95843 209 aa13.85□□□□□ -0.19
SHMT1P1-201ENST00000419974 ENO1P06733 434 aaKnown RBP13.85□□□□□ -0.19
SHMT1P1-201ENST00000419974 EBLN1P0CF75 366 aa13.85□□□□□ -0.19
SHMT1P1-201ENST00000419974 NCF1P14598 390 aaPredicted RBP13.85□□□□□ -0.19
SHMT1P1-201ENST00000419974 EPB42P16452 691 aa13.85□□□□□ -0.19
SHMT1P1-201ENST00000419974 INHBCP55103 352 aa13.85□□□□□ -0.19
SHMT1P1-201ENST00000419974 HNRNPKP61978 463 aaKnown RBP eCLIP13.85□□□□□ -0.19
SHMT1P1-201ENST00000419974 SH3BP2P78314 561 aa13.85□□□□□ -0.19
SHMT1P1-201ENST00000419974 FOXK2Q01167 660 aa13.85□□□□□ -0.19
SHMT1P1-201ENST00000419974 ZNF33BQ06732 778 aa13.85□□□□□ -0.19
SHMT1P1-201ENST00000419974 GTF2H2Q13888 395 aa13.85□□□□□ -0.19
SHMT1P1-201ENST00000419974 ELOCQ15369 112 aa13.85□□□□□ -0.19
SHMT1P1-201ENST00000419974 PTCHD3Q3KNS1 767 aa13.85□□□□□ -0.19
SHMT1P1-201ENST00000419974 LAIR1Q6GTX8 287 aa13.85□□□□□ -0.19
SHMT1P1-201ENST00000419974 GTF2H2CQ6P1K8 395 aa13.85□□□□□ -0.19
SHMT1P1-201ENST00000419974 AGTRAPQ6RW13 159 aa13.85□□□□□ -0.19
SHMT1P1-201ENST00000419974 EFL1Q7Z2Z2 1120 aaKnown RBP13.85□□□□□ -0.19
SHMT1P1-201ENST00000419974 HID1Q8IV36 788 aa13.85□□□□□ -0.19
SHMT1P1-201ENST00000419974 AFAP1L2Q8N4X5 818 aa13.85□□□□□ -0.19
SHMT1P1-201ENST00000419974 RAB42Q8N4Z0 105 aa13.85□□□□□ -0.19
SHMT1P1-201ENST00000419974 ZNF781Q8N8C0 355 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms