RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 MGRN1O60291 552 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 DOK2O60496 412 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 DAB1O75553 588 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 IDH1O75874 414 aaKnown RBP2.61□□□□□ -1.99
VPS41-206ENST00000418457 FLOT1O75955 427 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 KDM4BO94953 1096 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 PMS2P2O95744 297 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 GNA14O95837 355 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 SERPING1P05155 500 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 LINC00271P0C7V0 271 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 TGFB3P10600 412 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 SCG2P13521 617 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 UBA1P22314 1058 aaKnown RBP2.61□□□□□ -1.99
VPS41-206ENST00000418457 TM4SF1P30408 202 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 ADORA1P30542 326 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 UBA7P41226 1012 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 MAGEA1P43355 309 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 ZNF131P52739 623 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 GALCP54803 685 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 DRG2P55039 364 aaKnown RBP2.61□□□□□ -1.99
VPS41-206ENST00000418457 NLRP5P59047 1200 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 MRPS34P82930 218 aaKnown RBP2.61□□□□□ -1.99
VPS41-206ENST00000418457 LRRC63Q05C16 580 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 ACSM2AQ08AH3 577 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 C2orf54Q08AI8 447 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 GRSF1Q12849 480 aaKnown RBP eCLIP2.61□□□□□ -1.99
VPS41-206ENST00000418457 ZNF155Q12901 538 aaPredicted RBP2.61□□□□□ -1.99
VPS41-206ENST00000418457 ITGB3BPQ13352 177 aaPredicted RBP2.61□□□□□ -1.99
VPS41-206ENST00000418457 XRCC4Q13426 336 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 SLC39A6Q13433 755 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 ITIH4Q14624 930 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 SF3B4Q15427 424 aaKnown RBP eCLIP2.61□□□□□ -1.996e-8■□□□□ 10.4
VPS41-206ENST00000418457 ASIC2Q16515 512 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 CDC37Q16543 378 aaPredicted RBP2.61□□□□□ -1.99
VPS41-206ENST00000418457 PNLIPRP3Q17RR3 467 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 SOWAHCQ53LP3 525 aaPredicted RBP2.61□□□□□ -1.99
VPS41-206ENST00000418457 ANKRD20A8PQ5CZ79 823 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 DCST1Q5T197 706 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 FRG2Q64ET8 278 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 ACSM2BQ68CK6 577 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 ITPRIPL1Q6GPH6 555 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 KIAA1161Q6NSJ0 714 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 MZT2BQ6NZ67 158 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 CYB5D1Q6P9G0 228 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 RBM23Q86U06 439 aaKnown RBP2.61□□□□□ -1.99
VPS41-206ENST00000418457 HOOK3Q86VS8 718 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 CHERPQ8IWX8 916 aaKnown RBP2.61□□□□□ -1.99
VPS41-206ENST00000418457 HACE1Q8IYU2 909 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 BEST3Q8N1M1 668 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 TTC39CQ8N584 583 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 WDTC1Q8N5D0 677 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 PCDH20Q8N6Y1 951 aaKnown RBP2.61□□□□□ -1.99
VPS41-206ENST00000418457 ZNF713Q8N859 430 aaPredicted RBP2.61□□□□□ -1.99
VPS41-206ENST00000418457 GBP7Q8N8V2 638 aaPredicted RBP2.61□□□□□ -1.99
VPS41-206ENST00000418457 LILRB1Q8NHL6 650 aaPredicted RBP2.61□□□□□ -1.99
VPS41-206ENST00000418457 CFAP61Q8NHU2 1237 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 CCDC26Q8TAB7 109 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 ACTRT1Q8TDG2 376 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 TCP11Q8WWU5 503 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 TAF4BQ92750 862 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 N4BP2L2Q92802 583 aaPredicted RBP2.61□□□□□ -1.99
VPS41-206ENST00000418457 APBB2Q92870 758 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 TMEM19Q96HH6 336 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 EPSTI1Q96J88 318 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 IFT74Q96LB3 600 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 CNOT6LQ96LI5 555 aaKnown RBP2.61□□□□□ -1.99
VPS41-206ENST00000418457 CCDC43Q96MW1 224 aaKnown RBP2.61□□□□□ -1.99
VPS41-206ENST00000418457 ZNF385AQ96PM9 386 aaKnown RBP2.61□□□□□ -1.99
VPS41-206ENST00000418457 CCT8L2Q96SF2 557 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 NAP1L3Q99457 506 aaPredicted RBP2.61□□□□□ -1.99
VPS41-206ENST00000418457 SEPT5Q99719 369 aaPredicted RBP2.61□□□□□ -1.99
VPS41-206ENST00000418457 TSG101Q99816 390 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 LRRC1Q9BTT6 524 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 PUS3Q9BZE2 481 aaKnown RBP2.61□□□□□ -1.99
VPS41-206ENST00000418457 FAM129AQ9BZQ8 928 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 TRIM6Q9C030 488 aaPredicted RBP2.61□□□□□ -1.99
VPS41-206ENST00000418457 SYNCQ9H7C4 482 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 SEBOXQ9HB31 216 aaPredicted RBP2.61□□□□□ -1.99
VPS41-206ENST00000418457 TMBIM4Q9HC24 238 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 PCDH9Q9HC56 1237 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 EPB41L5Q9HCM4 733 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 SLC40A1Q9NP59 571 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 FAM114A2Q9NRY5 505 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 HOMER3Q9NSC5 361 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 TCP11L1Q9NUJ3 509 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 MCM9Q9NXL9 1143 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 ZNF224Q9NZL3 707 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 C1RLQ9NZP8 487 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 MALT1Q9UDY8 824 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 LRWD1Q9UFC0 647 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 OR14J1Q9UGF5 321 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 SIX4Q9UIU6 781 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 ACSL5Q9ULC5 683 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 VDAC3Q9Y277 283 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 R3HDM2Q9Y2K5 976 aaKnown RBP2.61□□□□□ -1.99
VPS41-206ENST00000418457 LOXL2Q9Y4K0 774 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 PCDHGB1Q9Y5G3 927 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 BZW2Q9Y6E2 419 aaKnown RBP2.61□□□□□ -1.99
VPS41-206ENST00000418457 SESN1Q9Y6P5 492 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 TOGARAM1Q9Y4F4 1720 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms