RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 A8MT66 165 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 UBXN8O00124 270 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 PPM1DO15297 605 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 PRICKLE3O43900 615 aaPredicted RBP12.9□□□□□ -0.34
CNN3-203ENST00000415017 SLC16A8O95907 504 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 BPGMP07738 259 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 CPA3P15088 417 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 IMPA1P29218 277 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 BDKRB1P46663 353 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 SERPINB4P48594 390 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 PRKAA2P54646 552 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 ALDH18A1P54886 795 aaKnown RBP12.9□□□□□ -0.34
CNN3-203ENST00000415017 IL9RQ01113 521 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 SPEM2Q0P670 501 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 SETDB1Q15047 1291 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 PCBP2Q15366 365 aaKnown RBP eCLIP12.9□□□□□ -0.34
CNN3-203ENST00000415017 TCEA2Q15560 299 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 PROX2Q3B8N5 592 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 SULT1C3Q6IMI6 304 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 TTC23LQ6PF05 361 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 SLC9B2Q86UD5 537 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 GATAD2AQ86YP4 633 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 SLC35F3Q8IY50 421 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 ARL10Q8N8L6 244 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 OR52E1Q8NGJ3 308 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 OR56A3Q8NH54 315 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 CFAP61Q8NHU2 1237 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 BAHD1Q8TBE0 780 aaPredicted RBP12.9□□□□□ -0.34
CNN3-203ENST00000415017 MDM1Q8TC05 714 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 MAPK15Q8TD08 544 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 ZNF480Q8WV37 535 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 SKA2Q8WVK7 121 aaPredicted RBP12.9□□□□□ -0.34
CNN3-203ENST00000415017 CCDC126Q96EE4 140 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 L3HYPDHQ96EM0 354 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 FERD3LQ96RJ6 166 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 TRIM54Q9BYV2 358 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 KCNK9Q9NPC2 374 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 RXFP3Q9NSD7 469 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 STOX2Q9P2F5 926 aaPredicted RBP12.9□□□□□ -0.34
CNN3-203ENST00000415017 TSR3Q9UJK0 312 aaKnown RBP12.9□□□□□ -0.34
CNN3-203ENST00000415017 MID2Q9UJV3 735 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 GVINP1Q7Z2Y8 2422 aa12.9□□□□□ -0.34
CNN3-203ENST00000415017 FAM221BA6H8Z2 402 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 KRT87PA6NCN2 255 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 LILRA5A6NI73 299 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 E7ENX8 843 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 NUDT21O43809 227 aaKnown RBP12.89□□□□□ -0.35
CNN3-203ENST00000415017 IPO13O94829 963 aaKnown RBP12.89□□□□□ -0.35
CNN3-203ENST00000415017 ANXA5P08758 320 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 HIST1H2AGP0C0S8 130 aaPredicted RBP12.89□□□□□ -0.35
CNN3-203ENST00000415017 CD59P13987 128 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 PNLIPP16233 465 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 HIST1H2ADP20671 130 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 IMPDH1P20839 514 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 PKLRP30613 574 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 HPDP32754 393 aaPredicted RBP12.89□□□□□ -0.35
CNN3-203ENST00000415017 HSD17B2P37059 387 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 MAZP56270 477 aaKnown RBP12.89□□□□□ -0.35
CNN3-203ENST00000415017 NHLH1Q02575 133 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 TAP2Q03519 686 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 PCDH1Q08174 1060 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 E2F2Q14209 437 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 GPR18Q14330 331 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 MBOAT1Q6ZNC8 495 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 PRR23CQ6ZRP0 262 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 TMEM26Q6ZUK4 368 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 SLC22A9Q8IVM8 553 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 TCAIMQ8N3R3 496 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 LINC01555Q8NAE3 123 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 KYQ8NBH2 561 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 CXorf40BQ96DE9 158 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 SCYL1Q96KG9 808 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 HIST1H2AHQ96KK5 128 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 HIST1H2AJQ99878 128 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 TMEM79Q9BSE2 394 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 H2AFJQ9BTM1 129 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 SGPP1Q9BX95 441 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 IQCGQ9H095 443 aaKnown RBP12.89□□□□□ -0.35
CNN3-203ENST00000415017 ARL15Q9NXU5 204 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 UTP6Q9NYH9 597 aaKnown RBP12.89□□□□□ -0.35
CNN3-203ENST00000415017 ICKQ9UPZ9 632 aa12.89□□□□□ -0.35
CNN3-203ENST00000415017 FAM186AA6NE01 2351 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 PCNX2A6NKB5 2137 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 A0A1W2PPV9 198 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 B4DGG1 531 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 SIGLEC6O43699 453 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 SMIM24O75264 130 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 VIPP01282 170 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 RPS17P08708 135 aaKnown RBP12.88□□□□□ -0.35
CNN3-203ENST00000415017 ALPPL2P10696 532 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 MYL2P10916 166 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 FGF3P11487 239 aaPredicted RBP12.88□□□□□ -0.35
CNN3-203ENST00000415017 CHN1P15882 459 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 GLB1P16278 677 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 TAC1P20366 129 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 MAP4P27816 1152 aaKnown RBP12.88□□□□□ -0.35
CNN3-203ENST00000415017 ALDH3A1P30838 453 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 RAB28P51157 221 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 HHEXQ03014 270 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 SQSTM1Q13501 440 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms