RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 FBXW2Q9UKT8 454 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 TRPC5Q9UL62 973 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-203ENST00000414174 WBP11Q9Y2W2 641 aaKnown RBP3.56□□□□□ -1.84
SF3B1-203ENST00000414174 HS3ST4Q9Y661 456 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 V9GYQ6 96 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 AOX1Q06278 1338 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 UBN2Q6ZU65 1347 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 KIAA1217Q5T5P2 1943 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-203ENST00000414174 TCRBV21S2A2A0A5A6 115 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 HELTA6NFD8 242 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF98A6NK75 572 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 DRGXA6NNA5 263 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 MEI4A8MW99 385 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 MYO1GB0I1T2 1018 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 TCP11X1B4DZS4 312 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 H7C1Q1 480 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 K7EQM0 130 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 HAS3O00219 553 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 CLDN4O14493 209 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 FCHO1O14526 889 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 SLC22A1O15245 554 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 BCAT2O15382 392 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-203ENST00000414174 TOX3O15405 576 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF264O43296 627 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 TNFSF14O43557 240 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 HBP1O60381 514 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 MAGEC1O60732 1142 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 MITFO75030 526 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-203ENST00000414174 GMNNO75496 209 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 WBP4O75554 376 aaKnown RBP3.55□□□□□ -1.84
SF3B1-203ENST00000414174 DFFBO76075 338 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 OR6B1O95007 311 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 PLEKHA8P1O95397 391 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 NDST3O95803 873 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 APOC1P02654 83 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 FGBP02675 491 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 AHSGP02765 367 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 FUCA1P04066 466 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 ANXA2P07355 339 aaKnown RBP3.55□□□□□ -1.84
SF3B1-203ENST00000414174 HBQ1P09105 142 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 ICAM2P13598 275 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 AKR1A1P14550 325 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 MX1P20591 662 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 TCEA1P23193 301 aaKnown RBP3.55□□□□□ -1.84
SF3B1-203ENST00000414174 CMA1P23946 247 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 FPR2P25090 351 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 UCP1P25874 307 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 GABRB3P28472 473 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 CD40LGP29965 261 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 GNA11P29992 359 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 PPP2R1AP30153 589 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 OXTRP30559 389 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 PKLRP30613 574 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 HTR7P34969 479 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 CD79BP40259 229 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 EIF2S3P41091 472 aaKnown RBP3.55□□□□□ -1.84
SF3B1-203ENST00000414174 ALDH3B2P48448 385 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 CDK7P50613 346 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 TOB1P50616 345 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-203ENST00000414174 RIDAP52758 137 aaKnown RBP3.55□□□□□ -1.84
SF3B1-203ENST00000414174 SUMO3P55854 103 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-203ENST00000414174 ACTBP60709 375 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 ST8SIA6P61647 398 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 YWHAGP61981 247 aaKnown RBP eCLIP3.55□□□□□ -1.84
SF3B1-203ENST00000414174 ACTA2P62736 377 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 GNAI1P63096 354 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 ACTG1P63261 375 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 ACTG2P63267 376 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 ACTC1P68032 377 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 ACTA1P68133 377 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 GUCY1A3Q02108 690 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 GRIN1Q05586 938 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 CACNG1Q06432 222 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 C2orf54Q08AI8 447 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 IFFO1Q0D2I5 559 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 TROAPQ12815 778 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 SNTA1Q13424 505 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 ENPP2Q13822 863 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 CAMK1Q14012 370 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 PDK2Q15119 407 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 MED22Q15528 200 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 ARHGAP15Q53QZ3 475 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 BEX5Q5H9J7 111 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 PHYHD1Q5SRE7 291 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 LRRC66Q68CR7 880 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 SNRNP48Q6IEG0 339 aaKnown RBP3.55□□□□□ -1.84
SF3B1-203ENST00000414174 SULT1C3Q6IMI6 304 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 RGS7BPQ6MZT1 257 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-203ENST00000414174 KLHL35Q6PF15 583 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 PRSS57Q6UWY2 283 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 STOX1Q6ZVD7 989 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 CHST9Q7L1S5 443 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 TRMT11Q7Z4G4 463 aaKnown RBP3.55□□□□□ -1.84
SF3B1-203ENST00000414174 SPRED1Q7Z699 444 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 ZDHHC21Q8IVQ6 265 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 FAM58AQ8N1B3 248 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 BATF2Q8N1L9 274 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 Q8N1Y9 231 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 PI4KAP1Q8N8J0 262 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms