RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 DBN1Q16643 649 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 HIF1AQ16665 826 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 PRAMEF13Q5VWM6 474 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 B3GNTL1Q67FW5 361 aaPredicted RBP11.7□□□□□ -0.54
LIMS2-210ENST00000413578 COX15Q7KZN9 410 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 SRRM1Q8IYB3 904 aaKnown RBP11.7□□□□□ -0.54
LIMS2-210ENST00000413578 TBC1D21Q8IYX1 336 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 RCOR2Q8IZ40 523 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 OR5K2Q8NHB8 316 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 GRHL3Q8TE85 626 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 COG1Q8WTW3 980 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 FAR1Q8WVX9 515 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 KRT35Q92764 455 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 N4BP2L2Q92802 583 aaPredicted RBP11.7□□□□□ -0.54
LIMS2-210ENST00000413578 CCDC42Q96M95 316 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 SLX1AQ9BQ83 275 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 MENTQ9BUN1 341 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 SLC26A1Q9H2B4 701 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 ZNHIT6Q9NWK9 470 aaKnown RBP11.7□□□□□ -0.54
LIMS2-210ENST00000413578 FBXL4Q9UKA2 621 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 PLCL2Q9UPR0 1127 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 PRSS21Q9Y6M0 314 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 PCM1Q15154 2024 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 CSMD2Q7Z408 3487 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 FBN2P35556 2912 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 GOLGA6L19H0YKK7 550 aa11.69□□□□□ -0.54
LIMS2-210ENST00000413578 HNRNPRO43390 633 aaKnown RBP11.69□□□□□ -0.54
LIMS2-210ENST00000413578 AP2A1O95782 977 aa11.69□□□□□ -0.54
LIMS2-210ENST00000413578 ALBP02768 609 aa11.69□□□□□ -0.54
LIMS2-210ENST00000413578 STSP08842 583 aa11.69□□□□□ -0.54
LIMS2-210ENST00000413578 EDN3P14138 238 aa11.69□□□□□ -0.54
LIMS2-210ENST00000413578 ELAVL4P26378 380 aaKnown RBP11.69□□□□□ -0.54
LIMS2-210ENST00000413578 ANP32AP39687 249 aaKnown RBP11.69□□□□□ -0.54
LIMS2-210ENST00000413578 OTUD4Q01804 1114 aaKnown RBP11.69□□□□□ -0.54
LIMS2-210ENST00000413578 KIR2DS3Q14952 304 aa11.69□□□□□ -0.54
LIMS2-210ENST00000413578 KCTD11Q693B1 232 aa11.69□□□□□ -0.54
LIMS2-210ENST00000413578 KIRREL2Q6UWL6 708 aa11.69□□□□□ -0.54
LIMS2-210ENST00000413578 OVCH1Q7RTY7 1134 aa11.69□□□□□ -0.54
LIMS2-210ENST00000413578 ACTL9Q8TC94 416 aa11.69□□□□□ -0.54
LIMS2-210ENST00000413578 MARVELD3Q96A59 401 aa11.69□□□□□ -0.54
LIMS2-210ENST00000413578 SPATA13Q96N96 652 aa11.69□□□□□ -0.54
LIMS2-210ENST00000413578 ZNF285Q96NJ3 590 aa11.69□□□□□ -0.54
LIMS2-210ENST00000413578 TBL1YQ9BQ87 522 aa11.69□□□□□ -0.54
LIMS2-210ENST00000413578 TRIM56Q9BRZ2 755 aaKnown RBP11.69□□□□□ -0.54
LIMS2-210ENST00000413578 NDC1Q9BTX1 674 aa11.69□□□□□ -0.54
LIMS2-210ENST00000413578 HEMGNQ9BXL5 484 aa11.69□□□□□ -0.54
LIMS2-210ENST00000413578 WDR54Q9H977 334 aa11.69□□□□□ -0.54
LIMS2-210ENST00000413578 TXLNGQ9NUQ3 528 aa11.69□□□□□ -0.54
LIMS2-210ENST00000413578 NLE1Q9NVX2 485 aaPredicted RBP11.69□□□□□ -0.54
LIMS2-210ENST00000413578 EURLQ9NYK6 297 aa11.69□□□□□ -0.54
LIMS2-210ENST00000413578 POLG2Q9UHN1 485 aa11.69□□□□□ -0.54
LIMS2-210ENST00000413578 FEZ2Q9UHY8 353 aaPredicted RBP11.69□□□□□ -0.54
LIMS2-210ENST00000413578 OSGIN2Q9Y236 505 aa11.69□□□□□ -0.54
LIMS2-210ENST00000413578 ASF1AQ9Y294 204 aa11.69□□□□□ -0.54
LIMS2-210ENST00000413578 HS3ST3B1Q9Y662 390 aa11.69□□□□□ -0.54
LIMS2-210ENST00000413578 DIDO1Q9BTC0 2240 aaKnown RBP11.69□□□□□ -0.54
LIMS2-210ENST00000413578 CNTRLQ7Z7A1 2325 aa11.69□□□□□ -0.54
LIMS2-210ENST00000413578 A0A1B0GX78 115 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 H7C0C1 242 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 PJA2O43164 708 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 ZG16O60844 167 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 ALOX12BO75342 701 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 MAGP20916 626 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 PKLRP30613 574 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 PTPN7P35236 360 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 NSG1P42857 185 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 ATP5OP48047 213 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 CACNG1Q06432 222 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 Q0VFX4 171 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 SPARCL1Q14515 664 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 ITIH4Q14624 930 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 ZNF169Q14929 603 aaPredicted RBP11.68□□□□□ -0.54
LIMS2-210ENST00000413578 NKG7Q16617 165 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 AGAP7PQ5VUJ5 663 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 ZNF324BQ6AW86 544 aaPredicted RBP11.68□□□□□ -0.54
LIMS2-210ENST00000413578 C11orf63Q6NUN7 778 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 ZNF449Q6P9G9 518 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 PACS1Q6VY07 963 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 HOOK3Q86VS8 718 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 CCDC50Q8IVM0 306 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 CDKL3Q8IVW4 592 aaPredicted RBP11.68□□□□□ -0.54
LIMS2-210ENST00000413578 VSTM4Q8IW00 320 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 LINC01555Q8NAE3 123 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 DNAJB14Q8TBM8 379 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 CCDC110Q8TBZ0 833 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 DLG3Q92796 817 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 CDKN2AIPNLQ96HQ2 116 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 AGAP4Q96P64 663 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 ANP32EQ9BTT0 268 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 UNKQ9C0B0 810 aaKnown RBP11.68□□□□□ -0.54
LIMS2-210ENST00000413578 EFR3BQ9Y2G0 817 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 POLQO75417 2590 aa11.68□□□□□ -0.54
LIMS2-210ENST00000413578 CCDC78A2IDD5 438 aa11.67□□□□□ -0.54
LIMS2-210ENST00000413578 VSTM2BA6NLU5 285 aa11.67□□□□□ -0.54
LIMS2-210ENST00000413578 QSOX1O00391 747 aa11.67□□□□□ -0.54
LIMS2-210ENST00000413578 KCNN4O15554 427 aa11.67□□□□□ -0.54
LIMS2-210ENST00000413578 TPM3P06753 285 aa11.67□□□□□ -0.54
LIMS2-210ENST00000413578 RBP3P10745 1247 aa11.67□□□□□ -0.54
LIMS2-210ENST00000413578 ARSFP54793 590 aa11.67□□□□□ -0.54
LIMS2-210ENST00000413578 PER3P56645 1201 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms