RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ELMOD1Q8N336 334 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 LGALS12Q96DT0 336 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 MYEOVQ96EZ4 313 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 DACH2Q96NX9 599 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 CTRCQ99895 268 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 NACA2Q9H009 215 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 RIBC2Q9H4K1 309 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 LRTM1Q9HBL6 345 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 TM9SF3Q9HD45 589 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 SACM1LQ9NTJ5 587 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 ZMYM5Q9UJ78 669 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 SAMD4AQ9UPU9 718 aaKnown RBP17.25■□□□□ 0.35
SDCBP-202ENST00000413219 ERVK-11Q9UQG0 969 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 UGT2A1Q9Y4X1 527 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 GMPPBQ9Y5P6 360 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 U3KQV3 271 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 SAGE2PA6NJ88 616 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 F5H5T6 163 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 H0Y626 953 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 TAF4O00268 1085 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 PER2O15055 1255 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 ARHGEF15O94989 841 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 TRIM16O95361 564 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 HMBSP08397 361 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 NCS1P62166 190 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 MAP2K5Q13163 448 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 SELENBP1Q13228 472 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 GBX1Q14549 363 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 DSC3Q14574 896 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 GTDC1Q4AE62 458 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 MORN1Q5T089 497 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 CES5AQ6NT32 575 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 DNAJC14Q6Y2X3 702 aaPredicted RBP17.24■□□□□ 0.35
SDCBP-202ENST00000413219 DSG4Q86SJ6 1040 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 TSPYL5Q86VY4 417 aaPredicted RBP17.24■□□□□ 0.35
SDCBP-202ENST00000413219 PLD3Q8IV08 490 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 PHACTR4Q8IZ21 702 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 TMEM132CQ8N3T6 1108 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 LPCAT1Q8NF37 534 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 FBXO32Q969P5 355 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 PARK7Q99497 189 aaKnown RBP17.24■□□□□ 0.35
SDCBP-202ENST00000413219 TLR8Q9NR97 1041 aaKnown RBP17.24■□□□□ 0.35
SDCBP-202ENST00000413219 FLRT1Q9NZU1 646 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 TRPS1Q9UHF7 1281 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 NDRG4Q9ULP0 352 aaKnown RBP17.24■□□□□ 0.35
SDCBP-202ENST00000413219 A0A0D9SEW6 157 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 TDRD15B5MCY1 1934 aaKnown RBP17.24■□□□□ 0.35
SDCBP-202ENST00000413219 UPK1BO75841 260 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 BMP1P13497 986 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 HOXB9P17482 250 aaPredicted RBP17.24■□□□□ 0.35
SDCBP-202ENST00000413219 UGT2B10P36537 528 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 GSSP48637 474 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 ALDH7A1P49419 539 aaKnown RBP17.24■□□□□ 0.35
SDCBP-202ENST00000413219 DAPP51397 102 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 OR2T5Q6IEZ7 315 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 CCDC81Q6ZN84 652 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 USP50Q70EL3 339 aaPredicted RBP17.24■□□□□ 0.35
SDCBP-202ENST00000413219 PAGE2Q7Z2X7 111 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 GALNT5Q7Z7M9 940 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 ZNF540Q8NDQ6 660 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 OR2T29Q8NH02 315 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 TXNDC15Q96J42 360 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 SIGLEC11Q96RL6 698 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 ADGRE3Q9BY15 652 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 MMP27Q9H306 513 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 OARD1Q9Y530 152 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 PCDHB5Q9Y5E4 795 aa17.24■□□□□ 0.35
SDCBP-202ENST00000413219 TTC3P53804 2025 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 F8W810 466 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 TAPBPO15533 448 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 KDELR3O43731 214 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 ULK1O75385 1050 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 SEC22BO75396 215 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 CCNDBP1O95273 360 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 OXSR1O95747 527 aaPredicted RBP17.23■□□□□ 0.35
SDCBP-202ENST00000413219 RPLP2P05387 115 aaKnown RBP17.23■□□□□ 0.35
SDCBP-202ENST00000413219 GSNP06396 782 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 PCSK2P16519 638 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 EFNA1P20827 205 aaPredicted RBP17.23■□□□□ 0.35
SDCBP-202ENST00000413219 TGFBR2P37173 567 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 HSPA7P48741 367 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 PHC1P78364 1004 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 SIM2Q14190 667 aaPredicted RBP17.23■□□□□ 0.35
SDCBP-202ENST00000413219 MAD2L1BPQ15013 274 aaPredicted RBP17.23■□□□□ 0.35
SDCBP-202ENST00000413219 ZNF181Q2M3W8 571 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 USP39Q53GS9 565 aaKnown RBP17.23■□□□□ 0.35
SDCBP-202ENST00000413219 UBE2UQ5VVX9 321 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 LAIR1Q6GTX8 287 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 KRTCAP2Q8N6L1 136 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 OR7D4Q8NG98 312 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 UBTD2Q8WUN7 234 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 ITCHQ96J02 903 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 TNKS2Q9H2K2 1166 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 NSUN3Q9H649 340 aaKnown RBP17.23■□□□□ 0.35
SDCBP-202ENST00000413219 IL1RAPQ9NPH3 570 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 ZNF229Q9UJW7 825 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 PADI3Q9ULW8 664 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 ANGPTL3Q9Y5C1 460 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 RAI2Q9Y5P3 530 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 ACTL7AQ9Y615 435 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms