RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 CHRNB1P11230 501 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 SKILP12757 684 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 ENO3P13929 434 aaPredicted RBP4.36□□□□□ -1.71
BRCA1-204ENST00000412061 CD22P20273 847 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 PSMA5P28066 241 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 TMOD1P28289 359 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 CDKN1AP38936 164 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 MAGEB1P43366 347 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 DHPSP49366 369 aaPredicted RBP4.36□□□□□ -1.71
BRCA1-204ENST00000412061 RGS7P49802 495 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 TMPRSS3P57727 454 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 INHBEP58166 350 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 CDK3Q00526 305 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 BEX3Q00994 111 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 GBE1Q04446 702 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 COX10Q12887 443 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 OVGP1Q12889 678 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 GRIK2Q13002 908 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 SPP2Q13103 211 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 MELKQ14680 651 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 TRIP6Q15654 476 aaKnown RBP4.36□□□□□ -1.71
BRCA1-204ENST00000412061 INPP5JQ15735 1006 aaPredicted RBP4.36□□□□□ -1.71
BRCA1-204ENST00000412061 ALS2CLQ60I27 953 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 NSUN5P2Q63ZY6 315 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 KCTD11Q693B1 232 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 SLC36A4Q6YBV0 504 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 C15orf52Q6ZUT6 534 aaKnown RBP4.36□□□□□ -1.71
BRCA1-204ENST00000412061 MEPCEQ7L2J0 689 aaKnown RBP4.36□□□□□ -1.71
BRCA1-204ENST00000412061 DENND6AQ8IWF6 608 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 SPATA6LQ8N4H0 392 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 ZNF611Q8N823 705 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 L3MBTL4Q8NA19 623 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 TMEM185AQ8NFB2 350 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 SLC24A4Q8NFF2 622 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 ORAI1Q96D31 301 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 C14orf79Q96F83 325 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 CDKN2AIPNLQ96HQ2 116 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 PRMT6Q96LA8 375 aaPredicted RBP4.36□□□□□ -1.71
BRCA1-204ENST00000412061 SFXN2Q96NB2 322 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 TPPP3Q9BW30 176 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 PUS3Q9BZE2 481 aaKnown RBP4.36□□□□□ -1.71
BRCA1-204ENST00000412061 MTMR12Q9C0I1 747 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 TMEM39BQ9GZU3 492 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 CARD9Q9H257 536 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 TM9SF3Q9HD45 589 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 MYNNQ9NPC7 610 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 PPANQ9NQ55 473 aaKnown RBP4.36□□□□□ -1.71
BRCA1-204ENST00000412061 ANKRD10Q9NXR5 420 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 DPP3Q9NY33 737 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 SLC9A2Q9UBY0 812 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 STK39Q9UEW8 545 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 UBQLN2Q9UHD9 624 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 SNX6Q9UNH7 406 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 PADI2Q9Y2J8 665 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 C2CD2Q9Y426 696 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 ASB3Q9Y575 518 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 A0A1B0GWJ7 208 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 A0A1W2PPQ1 181 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 A0A1W2PPW3 197 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 FAM90A10PA6NDY2 464 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 GAGE12JA6NER3 117 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 DUXAA6NLW8 204 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 EIF4E1BA6NMX2 242 aaKnown RBP4.35□□□□□ -1.71
BRCA1-204ENST00000412061 HEPACAM2A8MVW5 462 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 ZNF814B7Z6K7 855 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 STMND1H3BQB6 276 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 CASQ2O14958 399 aaPredicted RBP4.35□□□□□ -1.71
BRCA1-204ENST00000412061 SSX4O60224 188 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 CYTIPO60759 359 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 ATG13O75143 517 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 RAD51DO75771 328 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 CYP19A1P11511 503 aaPredicted RBP4.35□□□□□ -1.71
BRCA1-204ENST00000412061 UGT1A6P19224 532 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 FUT1P19526 365 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 CCNCP24863 283 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 CD38P28907 300 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 AVPR1AP37288 418 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 ATP5OP48047 213 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 METAP2P50579 478 aaKnown RBP eCLIP4.35□□□□□ -1.71
BRCA1-204ENST00000412061 SH3BGRP55822 239 aaPredicted RBP4.35□□□□□ -1.71
BRCA1-204ENST00000412061 SNRPEP62304 92 aaKnown RBP4.35□□□□□ -1.71
BRCA1-204ENST00000412061 SRSF4Q08170 494 aaKnown RBP4.35□□□□□ -1.71
BRCA1-204ENST00000412061 MTX1Q13505 466 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 EZH2Q15910 746 aaKnown RBP4.35□□□□□ -1.71
BRCA1-204ENST00000412061 TCTE1Q5JU00 501 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 C10orf25Q5T742 122 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 ASPHD1Q5U4P2 390 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 LRRC38Q5VT99 294 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 ANKRD54Q6NXT1 300 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 IRF2BP2Q7Z5L9 587 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 NRARPQ7Z6K4 114 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 GPR180Q86V85 440 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 SCCPDHQ8NBX0 429 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 OR56B2PQ8NGI1 322 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 OR52M1Q8NGK5 317 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 FIG4Q92562 907 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 OTULINQ96BN8 352 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 EPSTI1Q96J88 318 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 ZFYVE19Q96K21 471 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 OR6C1Q96RD1 312 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms