RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 NIPAL4Q0D2K0 466 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 GAGE2BQ13066 116 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 CAPRIN1Q14444 709 aaKnown RBP1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 MELKQ14680 651 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 FAM189A2Q15884 450 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 EXT1Q16394 746 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 GAGE2EQ4V326 116 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 NAA35Q5VZE5 725 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 FAM166AQ6J272 317 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 GAGE2AQ6NT46 116 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 VITQ6UXI7 678 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 LINGO4Q6UY18 593 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 KIF6Q6ZMV9 814 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 ZNF841Q6ZN19 808 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 AACSQ86V21 672 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 ARMC8Q8IUR7 673 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 ARHGAP12Q8IWW6 846 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 SCYL3Q8IZE3 742 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 FRMD1Q8N878 549 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 SUMF1Q8NBK3 374 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 APOBEC4Q8WW27 367 aaKnown RBP1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 SLC45A3Q96JT2 553 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 CNOT6LQ96LI5 555 aaKnown RBP1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 ZIM3Q96PE6 472 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 GAL3ST4Q96RP7 486 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 DPAGT1Q9H3H5 408 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 PLK3Q9H4B4 646 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 HEXA-AS1Q9H8Q6 139 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 RRP7BPQ9NSQ0 103 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 B3GAT1Q9P2W7 334 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 CACNG4Q9UBN1 327 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 GAGE2DQ9UEU5 116 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 POMT2Q9UKY4 750 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 VSIG4Q9Y279 399 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 ZNF256Q9Y2P7 627 aaPredicted RBP1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 CSNK1G3Q9Y6M4 447 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 KIF25-AS1Q9Y6Z4 181 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 FER1L5A0AVI2 2057 aa1.1□□□□□ -2.23
RNU2-55P-201ENST00000411146 ARID1AO14497 2285 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 A0A1W2PPH5 198 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 A6NLC8 198 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 NPIPB9F8W1W9 429 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 FPGTO14772 594 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 XRCC3O43542 346 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 OR10H2O60403 315 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 SNAP91O60641 907 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 ZNF354AO60765 605 aaPredicted RBP1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 AVILO75366 819 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 NDUFS3O75489 264 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 CREG1O75629 220 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 POP4O95707 220 aaKnown RBP1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 WDPCPO95876 746 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 GH2P01242 217 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 EIF2S1P05198 315 aaKnown RBP1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 SMIM18P0DKX4 95 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 HSD3B1P14060 373 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 JAK1P23458 1154 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 PTPN3P26045 913 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 CHRNA3P32297 505 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 SOX3P41225 446 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 ZFP36L2P47974 494 aaKnown RBP1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 SNRPEP62304 92 aaKnown RBP1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 BIRC2Q13490 618 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 ITGA7Q13683 1181 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 TNIP1Q15025 636 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 ASTE1Q2TB18 679 aaPredicted RBP1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 HIGD2BQ4VC39 106 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 PRR30Q53SZ7 412 aaPredicted RBP1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 RARS2Q5T160 578 aaKnown RBP1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 ACSM2BQ68CK6 577 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 FIGLAQ6QHK4 219 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 COMMD2Q86X83 199 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 DIS3L2Q8IYB7 885 aaKnown RBP1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 PARP8Q8N3A8 854 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 CD177Q8N6Q3 437 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 NPEPL1Q8NDH3 523 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 GPRC5AQ8NFJ5 357 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 OR6S1Q8NH40 331 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 TDRD7Q8NHU6 1098 aaKnown RBP1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 LRRC15Q8TF66 581 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 GATAD1Q8WUU5 269 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 PHLDA1Q8WV24 401 aaPredicted RBP1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 TOMM40LQ969M1 308 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 FAM149B1Q96BN6 582 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 OR6C1Q96RD1 312 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 CCDC28BQ9BUN5 200 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 ADNPQ9H2P0 1102 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 CPVLQ9H3G5 476 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 KAT14Q9H8E8 782 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 TEX10Q9NXF1 929 aaPredicted RBP1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 TAS2R14Q9NYV8 317 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 NYAP2Q9P242 653 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 GRID1Q9ULK0 1009 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 CRYL1Q9Y2S2 319 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 CMAHPQ9Y471 501 aa1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 LAS1LQ9Y4W2 734 aaKnown RBP1.09□□□□□ -2.23
RNU2-55P-201ENST00000411146 TMEM129A0AVI4 362 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 FRMD3A2A2Y4 597 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 ENO4A6NNW6 628 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 GPC4O75487 556 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms