RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 LNPEPQ9UIQ6 1025 aa17.6■□□□□ 0.41
PAX3-208ENST00000409828 TDRKHQ9Y2W6 561 aaKnown RBP17.6■□□□□ 0.41
PAX3-208ENST00000409828 KIF26BQ2KJY2 2108 aa17.6■□□□□ 0.41
PAX3-208ENST00000409828 CCDC151A5D8V7 595 aa17.59■□□□□ 0.41
PAX3-208ENST00000409828 ZNF839A8K0R7 811 aa17.59■□□□□ 0.41
PAX3-208ENST00000409828 HGSO14964 777 aaPredicted RBP17.59■□□□□ 0.41
PAX3-208ENST00000409828 FKBP9O95302 570 aa17.59■□□□□ 0.41
PAX3-208ENST00000409828 SLC35E2BP0CK96 405 aa17.59■□□□□ 0.41
PAX3-208ENST00000409828 THRAP10827 490 aa17.59■□□□□ 0.41
PAX3-208ENST00000409828 TYRP1P17643 537 aa17.59■□□□□ 0.41
PAX3-208ENST00000409828 SERPINB8P50452 374 aa17.59■□□□□ 0.41
PAX3-208ENST00000409828 INHBCP55103 352 aa17.59■□□□□ 0.41
PAX3-208ENST00000409828 AP1S2P56377 157 aa17.59■□□□□ 0.41
PAX3-208ENST00000409828 SHC2P98077 582 aa17.59■□□□□ 0.41
PAX3-208ENST00000409828 CYP2A13Q16696 494 aa17.59■□□□□ 0.41
PAX3-208ENST00000409828 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.59■□□□□ 0.41
PAX3-208ENST00000409828 ANKS6Q68DC2 871 aa17.59■□□□□ 0.41
PAX3-208ENST00000409828 TIFABQ6ZNK6 161 aa17.59■□□□□ 0.41
PAX3-208ENST00000409828 UBE2R2Q712K3 238 aaPredicted RBP17.59■□□□□ 0.41
PAX3-208ENST00000409828 ADAMTSL2Q86TH1 951 aa17.59■□□□□ 0.41
PAX3-208ENST00000409828 ADGRF3Q8IZF5 1079 aa17.59■□□□□ 0.41
PAX3-208ENST00000409828 OR2L8Q8NGY9 312 aa17.59■□□□□ 0.41
PAX3-208ENST00000409828 MRRFQ96E11 262 aaKnown RBP17.59■□□□□ 0.41
PAX3-208ENST00000409828 TRIM54Q9BYV2 358 aa17.59■□□□□ 0.41
PAX3-208ENST00000409828 STRADBQ9C0K7 418 aa17.59■□□□□ 0.41
PAX3-208ENST00000409828 CAB39LQ9H9S4 337 aa17.59■□□□□ 0.41
PAX3-208ENST00000409828 PSMC3IPQ9P2W1 217 aaPredicted RBP17.59■□□□□ 0.41
PAX3-208ENST00000409828 ATXN7L1Q9ULK2 861 aaPredicted RBP17.59■□□□□ 0.41
PAX3-208ENST00000409828 RUVBL2Q9Y230 463 aaKnown RBP17.59■□□□□ 0.41
PAX3-208ENST00000409828 ACOT9Q9Y305 439 aa17.59■□□□□ 0.41
PAX3-208ENST00000409828 NEUROG3Q9Y4Z2 214 aa17.59■□□□□ 0.41
PAX3-208ENST00000409828 SNRNP200O75643 2136 aaKnown RBP17.59■□□□□ 0.41
PAX3-208ENST00000409828 A0A087X1B8 175 aa17.58■□□□□ 0.4
PAX3-208ENST00000409828 IGHV5-10-1A0A0J9YXX1 117 aa17.58■□□□□ 0.4
PAX3-208ENST00000409828 IQANK1A0A1B0GTG1 560 aa17.58■□□□□ 0.4
PAX3-208ENST00000409828 OR6C74A6NCV1 312 aa17.58■□□□□ 0.4
PAX3-208ENST00000409828 CASC3O15234 703 aaKnown RBP17.58■□□□□ 0.4
PAX3-208ENST00000409828 CAPN5O15484 640 aaPredicted RBP17.58■□□□□ 0.4
PAX3-208ENST00000409828 PHGDHO43175 533 aaKnown RBP17.58■□□□□ 0.4
PAX3-208ENST00000409828 CTIFO43310 598 aaKnown RBP17.58■□□□□ 0.4
PAX3-208ENST00000409828 CSO75390 466 aaKnown RBP17.58■□□□□ 0.4
PAX3-208ENST00000409828 ERLIN1O75477 346 aa17.58■□□□□ 0.4
PAX3-208ENST00000409828 ALDOAP04075 364 aaKnown RBP17.58■□□□□ 0.4
PAX3-208ENST00000409828 HOXB3P14651 431 aaPredicted RBP17.58■□□□□ 0.4
PAX3-208ENST00000409828 ZNF460Q14592 562 aa17.58■□□□□ 0.4
PAX3-208ENST00000409828 NAA30Q147X3 362 aaPredicted RBP17.58■□□□□ 0.4
PAX3-208ENST00000409828 KIR2DS3Q14952 304 aa17.58■□□□□ 0.4
PAX3-208ENST00000409828 ARMC6Q6NXE6 501 aa17.58■□□□□ 0.4
PAX3-208ENST00000409828 TMPRSS9Q7Z410 1059 aa17.58■□□□□ 0.4
PAX3-208ENST00000409828 PRSS42Q7Z5A4 293 aa17.58■□□□□ 0.4
PAX3-208ENST00000409828 ARHGAP22Q7Z5H3 698 aa17.58■□□□□ 0.4
PAX3-208ENST00000409828 ANKRD49Q8WVL7 239 aa17.58■□□□□ 0.4
PAX3-208ENST00000409828 SLC22A18Q96BI1 424 aa17.58■□□□□ 0.4
PAX3-208ENST00000409828 CCDC138Q96M89 665 aa17.58■□□□□ 0.4
PAX3-208ENST00000409828 SYNDIG1Q9H7V2 258 aa17.58■□□□□ 0.4
PAX3-208ENST00000409828 SNX15Q9NRS6 342 aa17.58■□□□□ 0.4
PAX3-208ENST00000409828 TLK1Q9UKI8 766 aa17.58■□□□□ 0.4
PAX3-208ENST00000409828 POMT2Q9UKY4 750 aa17.58■□□□□ 0.4
PAX3-208ENST00000409828 C2orf74A8MZ97 194 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 BTN3A3O00478 584 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 MPOP05164 745 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 C2P06681 752 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 HIST1H2AGP0C0S8 130 aaPredicted RBP17.57■□□□□ 0.4
PAX3-208ENST00000409828 CCDC166P0CW27 439 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 COL6A2P12110 1019 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 HIST1H2ADP20671 130 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 TYK2P29597 1187 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 BDKRB1P46663 353 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 PGGT1BP53609 377 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 CDKL1Q00532 357 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 FOXC1Q12948 553 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 TARDBPQ13148 414 aaKnown RBP eCLIP17.57■□□□□ 0.4
PAX3-208ENST00000409828 BMPR2Q13873 1038 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 TAF1BQ53T94 588 aaPredicted RBP17.57■□□□□ 0.4
PAX3-208ENST00000409828 CDKL4Q5MAI5 379 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 SBSNQ6UWP8 590 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 RAPH1Q70E73 1250 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 CMC1Q7Z7K0 106 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 TBC1D1Q86TI0 1168 aaPredicted RBP17.57■□□□□ 0.4
PAX3-208ENST00000409828 KMT5CQ86Y97 462 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 RIBC1Q8N443 379 aaPredicted RBP17.57■□□□□ 0.4
PAX3-208ENST00000409828 DENND1AQ8TEH3 1009 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 DLG3Q92796 817 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 CABS1Q96KC9 395 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 HIST1H2AHQ96KK5 128 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 HIST1H2AJQ99878 128 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 H2AFJQ9BTM1 129 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 ROPN1BQ9BZX4 212 aaPredicted RBP17.57■□□□□ 0.4
PAX3-208ENST00000409828 ROPN1Q9HAT0 212 aaPredicted RBP17.57■□□□□ 0.4
PAX3-208ENST00000409828 NMRAL1Q9HBL8 299 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 PDE10AQ9Y233 779 aa17.57■□□□□ 0.4
PAX3-208ENST00000409828 PIPSLA2A3N6 862 aa17.56■□□□□ 0.4
PAX3-208ENST00000409828 TLCD2A6NGC4 264 aa17.56■□□□□ 0.4
PAX3-208ENST00000409828 BTN3A1O00481 513 aa17.56■□□□□ 0.4
PAX3-208ENST00000409828 HYAL3O43820 417 aaPredicted RBP17.56■□□□□ 0.4
PAX3-208ENST00000409828 CDH16O75309 829 aa17.56■□□□□ 0.4
PAX3-208ENST00000409828 CHRM5P08912 532 aaPredicted RBP17.56■□□□□ 0.4
PAX3-208ENST00000409828 CD1DP15813 335 aa17.56■□□□□ 0.4
PAX3-208ENST00000409828 PPM1FP49593 454 aaPredicted RBP17.56■□□□□ 0.4
PAX3-208ENST00000409828 PPP1R3AQ16821 1122 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms