RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 MAFBQ9Y5Q3 323 aaPredicted RBP5.99□□□□□ -1.45
SCN1A-203ENST00000409050 FAM159BA6NKW6 160 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 PLSCR1O15162 318 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 ABCB7O75027 752 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 CDK14O94921 469 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 EN1Q05925 392 aaPredicted RBP5.99□□□□□ -1.45
SCN1A-203ENST00000409050 CD47Q08722 323 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 CHIT1Q13231 466 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 CBFBQ13951 182 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 FAM110CQ1W6H9 321 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 CRTC2Q53ET0 693 aaPredicted RBP5.99□□□□□ -1.45
SCN1A-203ENST00000409050 SLC9A4Q6AI14 798 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 OR2T5Q6IEZ7 315 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 ABHD13Q7L211 337 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 C16orf59Q7L2K0 433 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 ADGRA1Q86SQ6 560 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 CAND1Q86VP6 1230 aaKnown RBP5.99□□□□□ -1.45
SCN1A-203ENST00000409050 TOMM5Q8N4H5 51 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 GPR156Q8NFN8 814 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 OR2T29Q8NH02 315 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 IL31RAQ8NI17 732 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 ADAMTS18Q8TE60 1221 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 KREMEN1Q96MU8 473 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 ZNF570Q96NI8 536 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 GPR21Q99679 349 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 MCMBPQ9BTE3 642 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 POLR2J2Q9GZM3 115 aaKnown RBP5.99□□□□□ -1.45
SCN1A-203ENST00000409050 EXO5Q9H790 373 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 TBC1D24Q9ULP9 559 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 KCNIP3Q9Y2W7 256 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 WASF2Q9Y6W5 498 aa5.99□□□□□ -1.45
SCN1A-203ENST00000409050 DPPA5A6NC42 116 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 KCNU1A8MYU2 1149 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 ZNF701M0R085 212 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-203ENST00000409050 PHYHO14832 338 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 MID1O15344 667 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 PRLP01236 227 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 GLDCP23378 1020 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 GALK1P51570 392 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 NRG3P56975 720 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 RPL7AP62424 266 aaKnown RBP5.98□□□□□ -1.45
SCN1A-203ENST00000409050 GXYLT1Q4G148 440 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 ABCA11PQ4W5N1 156 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 HSD17B12Q53GQ0 312 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 BRAT1Q6PJG6 821 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 TMPRSS11BQ86T26 416 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 ZNF227Q86WZ6 799 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 GPR65Q8IYL9 337 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 CRYBG2Q8N1P7 616 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 PLD6Q8N2A8 252 aaKnown RBP5.98□□□□□ -1.45
SCN1A-203ENST00000409050 CAMKVQ8NCB2 501 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 PSD4Q8NDX1 1056 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 OR8J3Q8NGG0 315 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 C1orf216Q8TAB5 229 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 SPACA7Q96KW9 195 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 TSSK3Q96PN8 268 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 OR52B2Q96RD2 323 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 ZSCAN5AQ9BUG6 496 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 PRRG4Q9BZD6 226 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 ZDHHC3Q9NYG2 299 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 EGFL7Q9UHF1 273 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 IFT52Q9Y366 437 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 MAB21L2Q9Y586 359 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 TIMM13Q9Y5L4 95 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-203ENST00000409050 CNTNAP1P78357 1384 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 EIF3FO00303 357 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-203ENST00000409050 ZNF208O43345 1280 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 BCAS2O75934 225 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-203ENST00000409050 ATG12O94817 140 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 OXSR1O95747 527 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-203ENST00000409050 EBLN1P0CF75 366 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 MAZP56270 477 aaKnown RBP5.98□□□□□ -1.45
SCN1A-203ENST00000409050 DCDC1P59894 354 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 NPTX1Q15818 432 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 MAPK14Q16539 360 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 DUOXA1Q1HG43 343 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 VMACQ2NL98 169 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 WSCD2Q2TBF2 565 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 HACD4Q5VWC8 232 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 LPCAT4Q643R3 524 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 FSTL4Q6MZW2 842 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 METTL2BQ6P1Q9 378 aaKnown RBP5.98□□□□□ -1.45
SCN1A-203ENST00000409050 NCEH1Q6PIU2 408 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 UBQLNLQ8IYU4 475 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 KIAA0319LQ8IZA0 1049 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 ZBTB8BQ8NAP8 495 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-203ENST00000409050 FBXO22Q8NEZ5 403 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 RGMAQ96B86 450 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 RBM18Q96H35 190 aaKnown RBP5.98□□□□□ -1.45
SCN1A-203ENST00000409050 TMEM175Q9BSA9 504 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 MAGIXQ9H6Y5 334 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 C12orf4Q9NQ89 552 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.98□□□□□ -1.45
SCN1A-203ENST00000409050 NLGN3Q9NZ94 848 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 STUB1Q9UNE7 303 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 TLR6Q9Y2C9 796 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 BORCS7-ASMTA0A0B4J1R7 106 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 YDJCA8MPS7 323 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 TLR4O00206 839 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 MFSD11O43934 449 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms