RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 STX7O15400 261 aaKnown RBP11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 CELA2AP08217 269 aa11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 CHRM5P08912 532 aaPredicted RBP11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 CA7P43166 264 aa11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 TNFSF10P50591 281 aa11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 ALKBH5Q6P6C2 394 aaKnown RBP11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 SARM1Q6SZW1 724 aa11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 GFRALQ6UXV0 394 aa11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 TTLL10Q6ZVT0 673 aa11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 ZNF567Q8N184 647 aa11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 METTL27Q8N6F8 245 aaPredicted RBP11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 ADAMTS18Q8TE60 1221 aa11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 COG1Q8WTW3 980 aa11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 TFGQ92734 400 aaPredicted RBP11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 C8orf44Q96CB5 159 aa11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 MAGEB10Q96LZ2 347 aaPredicted RBP11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 FCRL5Q96RD9 977 aa11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 LMF1Q96S06 567 aa11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 SLC26A1Q9H2B4 701 aa11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 MVB12BQ9H7P6 319 aa11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 C10orf88Q9H8K7 445 aa11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 CHST11Q9NPF2 352 aa11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 TXLNGQ9NUQ3 528 aa11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 ANO10Q9NW15 660 aa11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 EURLQ9NYK6 297 aa11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 HACD3Q9P035 362 aa11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 PKP3Q9Y446 797 aa11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 IGLV3-16A0A075B6K0 115 aa11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 A0A0J9YY10 115 aa11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 PPP1R12AO14974 1030 aaPredicted RBP11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 KCNN4O15554 427 aa11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 UNC5CO95185 931 aa11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 ATP1B2P14415 290 aaPredicted RBP11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 ALAS2P22557 587 aa11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 ACADLP28330 430 aa11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 OR1D4P47884 311 aa11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 CD151P48509 253 aa11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 STX1AQ16623 288 aa11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 FCRL6Q6DN72 434 aa11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 TLDC1Q6P9B6 456 aa11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 MFSD7Q6UXD7 560 aa11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 NAPRTQ6XQN6 538 aa11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 CLDN19Q8N6F1 224 aa11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 ACBD4Q8NC06 268 aa11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 FKBP10Q96AY3 582 aa11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 NACC2Q96BF6 587 aa11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 RNF25Q96BH1 459 aaPredicted RBP11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 APOL2Q9BQE5 337 aa11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 EPS8L2Q9H6S3 715 aa11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 WDR54Q9H977 334 aa11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 ZNF160Q9HCG1 818 aa11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 CTTNBP2NLQ9P2B4 639 aa11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 PLCL2Q9UPR0 1127 aa11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 PRSS21Q9Y6M0 314 aa11.4□□□□□ -0.58
SPTLC1P3-201ENST00000403408 KLHL33A6NCF5 533 aa11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ZNHIT1O43257 154 aa11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ALBP02768 609 aa11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 CD63P08962 238 aa11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 PYGMP11217 842 aa11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 MAGP20916 626 aa11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ADRA1AP35348 466 aa11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 PBX1P40424 430 aa11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ZNF140P52738 457 aaPredicted RBP11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 EFNA3P52797 238 aa11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 PMP22Q01453 160 aa11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 MESDQ14696 234 aa11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 NR1I3Q14994 352 aa11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 C3AR1Q16581 482 aa11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 TAZQ16635 292 aa11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 SLC5A12Q1EHB4 618 aa11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 TUBB8Q3ZCM7 444 aa11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 CDH24Q86UP0 819 aa11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 RFX6Q8HWS3 928 aa11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 MCATQ8IVS2 390 aaKnown RBP11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 LINC01555Q8NAE3 123 aa11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 BRIX1Q8TDN6 353 aaKnown RBP11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 N4BP2L2Q92802 583 aaPredicted RBP11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 NDC1Q9BTX1 674 aa11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 MENTQ9BUN1 341 aa11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 FICDQ9BVA6 458 aa11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 HYOU1Q9Y4L1 999 aa11.39□□□□□ -0.59
SPTLC1P3-201ENST00000403408 SCN2AQ99250 2005 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 TRBV5-4A0A0C4DH59 114 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 A0A1B0GX78 115 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 BHMG1C9JSJ3 638 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 IFRD1O00458 451 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 MAP3K7O43318 606 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 NRP2O60462 931 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 SERPING1P05155 500 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 GRIA3P42263 894 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 TAF1AQ15573 450 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 NFKBIBQ15653 356 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 RBBP7Q16576 425 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 VWA2Q5GFL6 755 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 FIGNQ5HY92 759 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ATG9BQ674R7 924 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 DENND5AQ6IQ26 1287 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 TMEM207Q6UWW9 146 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 RANBP10Q6VN20 620 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms