RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 STN1Q9H668 368 aaKnown RBP15.48■□□□□ 0.07
HMGA1-204ENST00000401473 ALG9Q9H6U8 611 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 ICKQ9UPZ9 632 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 IGHV1OR21-1A0A087WYE8 117 aa15.47■□□□□ 0.07
HMGA1-204ENST00000401473 MAP2K7O14733 419 aa15.47■□□□□ 0.07
HMGA1-204ENST00000401473 SLC16A8O95907 504 aa15.47■□□□□ 0.07
HMGA1-204ENST00000401473 TFEBP19484 476 aa15.47■□□□□ 0.07
HMGA1-204ENST00000401473 CD1CP29017 333 aa15.47■□□□□ 0.07
HMGA1-204ENST00000401473 CCNFP41002 786 aa15.47■□□□□ 0.07
HMGA1-204ENST00000401473 ATP6V0D1P61421 351 aa15.47■□□□□ 0.07
HMGA1-204ENST00000401473 CCL7P80098 99 aa15.47■□□□□ 0.07
HMGA1-204ENST00000401473 FAM83EQ2M2I3 478 aa15.47■□□□□ 0.07
HMGA1-204ENST00000401473 C4orf33Q8N1A6 199 aa15.47■□□□□ 0.07
HMGA1-204ENST00000401473 LINC01555Q8NAE3 123 aa15.47■□□□□ 0.07
HMGA1-204ENST00000401473 AVL9Q8NBF6 648 aa15.47■□□□□ 0.07
HMGA1-204ENST00000401473 OR9A1PQ8NGU1 263 aa15.47■□□□□ 0.07
HMGA1-204ENST00000401473 ACMSDQ8TDX5 336 aa15.47■□□□□ 0.07
HMGA1-204ENST00000401473 LCN9Q8WX39 176 aa15.47■□□□□ 0.07
HMGA1-204ENST00000401473 NMRAL1Q9HBL8 299 aa15.47■□□□□ 0.07
HMGA1-204ENST00000401473 KCNK4Q9NYG8 393 aa15.47■□□□□ 0.07
HMGA1-204ENST00000401473 LILRA5A6NI73 299 aa15.46■□□□□ 0.07
HMGA1-204ENST00000401473 MYO1CO00159 1063 aa15.46■□□□□ 0.07
HMGA1-204ENST00000401473 SLC16A5O15375 505 aa15.46■□□□□ 0.07
HMGA1-204ENST00000401473 RGS16O15492 202 aaPredicted RBP15.46■□□□□ 0.07
HMGA1-204ENST00000401473 UBXN7O94888 489 aa15.46■□□□□ 0.07
HMGA1-204ENST00000401473 SYF2O95926 243 aaKnown RBP15.46■□□□□ 0.07
HMGA1-204ENST00000401473 RPN2P04844 631 aa15.46■□□□□ 0.07
HMGA1-204ENST00000401473 COL6A2P12110 1019 aa15.46■□□□□ 0.07
HMGA1-204ENST00000401473 MAPK9P45984 424 aa15.46■□□□□ 0.07
HMGA1-204ENST00000401473 SLC18A2Q05940 514 aa15.46■□□□□ 0.07
HMGA1-204ENST00000401473 FASTKQ14296 549 aaKnown RBP15.46■□□□□ 0.07
HMGA1-204ENST00000401473 ACAP2Q15057 778 aa15.46■□□□□ 0.07
HMGA1-204ENST00000401473 PLCL1Q15111 1095 aa15.46■□□□□ 0.07
HMGA1-204ENST00000401473 AMZ1Q400G9 498 aa15.46■□□□□ 0.07
HMGA1-204ENST00000401473 TTC23LQ6PF05 361 aa15.46■□□□□ 0.07
HMGA1-204ENST00000401473 USP53Q70EK8 1073 aa15.46■□□□□ 0.07
HMGA1-204ENST00000401473 TMPRSS9Q7Z410 1059 aa15.46■□□□□ 0.07
HMGA1-204ENST00000401473 SRRM1Q8IYB3 904 aaKnown RBP15.46■□□□□ 0.07
HMGA1-204ENST00000401473 C2orf73Q8N5S3 287 aaPredicted RBP15.46■□□□□ 0.07
HMGA1-204ENST00000401473 MAGEC3Q8TD91 643 aa15.46■□□□□ 0.07
HMGA1-204ENST00000401473 MCOLN3Q8TDD5 553 aa15.46■□□□□ 0.07
HMGA1-204ENST00000401473 RSC1A1Q92681 617 aa15.46■□□□□ 0.07
HMGA1-204ENST00000401473 CABS1Q96KC9 395 aa15.46■□□□□ 0.07
HMGA1-204ENST00000401473 ATOH8Q96SQ7 321 aa15.46■□□□□ 0.07
HMGA1-204ENST00000401473 CENPHQ9H3R5 247 aa15.46■□□□□ 0.07
HMGA1-204ENST00000401473 RDH14Q9HBH5 336 aa15.46■□□□□ 0.07
HMGA1-204ENST00000401473 TMEM216Q9P0N5 145 aa15.46■□□□□ 0.07
HMGA1-204ENST00000401473 NCOR2Q9Y618 2525 aa15.46■□□□□ 0.07
HMGA1-204ENST00000401473 HEATR5BQ9P2D3 2071 aa15.46■□□□□ 0.07
HMGA1-204ENST00000401473 KIF26BQ2KJY2 2108 aa15.46■□□□□ 0.07
HMGA1-204ENST00000401473 BTN3A3O00478 584 aa15.46■□□□□ 0.06
HMGA1-204ENST00000401473 GUCA1CO95843 209 aa15.46■□□□□ 0.06
HMGA1-204ENST00000401473 GP1BAP07359 652 aa15.46■□□□□ 0.06
HMGA1-204ENST00000401473 SBK3P0C264 359 aa15.46■□□□□ 0.06
HMGA1-204ENST00000401473 MAP4P27816 1152 aaKnown RBP15.46■□□□□ 0.06
HMGA1-204ENST00000401473 SP140Q13342 867 aa15.46■□□□□ 0.06
HMGA1-204ENST00000401473 PUM1Q14671 1186 aaKnown RBP eCLIP15.46■□□□□ 0.06
HMGA1-204ENST00000401473 TGFBIQ15582 683 aa15.46■□□□□ 0.06
HMGA1-204ENST00000401473 CCDC157Q569K6 752 aa15.46■□□□□ 0.06
HMGA1-204ENST00000401473 EXOC3L1Q86VI1 746 aa15.46■□□□□ 0.06
HMGA1-204ENST00000401473 AMIGO1Q86WK6 493 aa15.46■□□□□ 0.06
HMGA1-204ENST00000401473 ADGRF3Q8IZF5 1079 aa15.46■□□□□ 0.06
HMGA1-204ENST00000401473 CNPY4Q8N129 248 aa15.46■□□□□ 0.06
HMGA1-204ENST00000401473 ZNF480Q8WV37 535 aa15.46■□□□□ 0.06
HMGA1-204ENST00000401473 PGM2Q96G03 612 aa15.46■□□□□ 0.06
HMGA1-204ENST00000401473 TWSG1Q9GZX9 223 aa15.46■□□□□ 0.06
HMGA1-204ENST00000401473 C12orf65Q9H3J6 166 aaKnown RBP15.46■□□□□ 0.06
HMGA1-204ENST00000401473 SRMSQ9H3Y6 488 aa15.46■□□□□ 0.06
HMGA1-204ENST00000401473 NOVA2Q9UNW9 492 aaKnown RBP15.46■□□□□ 0.06
HMGA1-204ENST00000401473 OR6C74A6NCV1 312 aa15.45■□□□□ 0.06
HMGA1-204ENST00000401473 DKK1O94907 266 aa15.45■□□□□ 0.06
HMGA1-204ENST00000401473 MTHFD2P13995 350 aa15.45■□□□□ 0.06
HMGA1-204ENST00000401473 HOXB3P14651 431 aaPredicted RBP15.45■□□□□ 0.06
HMGA1-204ENST00000401473 CYP2A7P20853 494 aa15.45■□□□□ 0.06
HMGA1-204ENST00000401473 RAB28P51157 221 aa15.45■□□□□ 0.06
HMGA1-204ENST00000401473 PPP1CAP62136 330 aa15.45■□□□□ 0.06
HMGA1-204ENST00000401473 C16orf46Q6P387 395 aa15.45■□□□□ 0.06
HMGA1-204ENST00000401473 ADAMTSL2Q86TH1 951 aa15.45■□□□□ 0.06
HMGA1-204ENST00000401473 RHEBL1Q8TAI7 183 aa15.45■□□□□ 0.06
HMGA1-204ENST00000401473 STAG3L4Q8TBR4 150 aa15.45■□□□□ 0.06
HMGA1-204ENST00000401473 VIPAS39Q9H9C1 493 aa15.45■□□□□ 0.06
HMGA1-204ENST00000401473 ARL15Q9NXU5 204 aa15.45■□□□□ 0.06
HMGA1-204ENST00000401473 SPHK1Q9NYA1 384 aa15.45■□□□□ 0.06
HMGA1-204ENST00000401473 ATXN7L1Q9ULK2 861 aaPredicted RBP15.45■□□□□ 0.06
HMGA1-204ENST00000401473 OARD1Q9Y530 152 aa15.45■□□□□ 0.06
HMGA1-204ENST00000401473 SPTBP11277 2137 aa15.45■□□□□ 0.06
HMGA1-204ENST00000401473 CEP295Q9C0D2 2601 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 HIST1H2AGP0C0S8 130 aaPredicted RBP15.44■□□□□ 0.06
HMGA1-204ENST00000401473 FTH1P19P0C7X4 201 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 MYZAPP0CAP1 466 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 ERGP11308 486 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 HIST1H2ADP20671 130 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 IMPA1P29218 277 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 PKLRP30613 574 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 ID4P47928 161 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 EPHA4P54764 986 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 TECRLQ5HYJ1 363 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 ZNF574Q6ZN55 896 aaPredicted RBP15.44■□□□□ 0.06
HMGA1-204ENST00000401473 GPSM1Q86YR5 675 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 BANPQ8N9N5 519 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms