RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 RIIAD1A6NNX1 92 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 VNN2O95498 520 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 CSF2RAP15509 400 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 FBLP22087 321 aaKnown RBP10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 CFL1P23528 166 aaKnown RBP10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 CACNG1Q06432 222 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 KYQ8NBH2 561 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 FAM3CQ92520 227 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 GFM1Q96RP9 751 aaKnown RBP10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 TTYH3Q9C0H2 523 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 SPEF2Q9C093 1822 aa10.77□□□□□ -0.68
CACNA1C-216ENST00000399638 NDUFS4O43181 175 aa10.77□□□□□ -0.68
CACNA1C-216ENST00000399638 LDLRP01130 860 aa10.77□□□□□ -0.68
CACNA1C-216ENST00000399638 SLC2A7Q6PXP3 512 aa10.77□□□□□ -0.68
CACNA1C-216ENST00000399638 TRAPPC6BQ86SZ2 158 aa10.77□□□□□ -0.68
CACNA1C-216ENST00000399638 GPR180Q86V85 440 aa10.77□□□□□ -0.68
CACNA1C-216ENST00000399638 VCPIP1Q96JH7 1222 aa10.77□□□□□ -0.68
CACNA1C-216ENST00000399638 KCNH6Q9H252 994 aa10.77□□□□□ -0.68
CACNA1C-216ENST00000399638 TEX46H3BTG2 121 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 PRAMEF1O95521 474 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 PRLP01236 227 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 HLA-EP13747 358 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 ECHS1P30084 290 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 C1orf61Q13536 156 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 BAP1Q92560 729 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 SNRNP25Q9BV90 132 aaKnown RBP10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 MEAF6Q9HAF1 191 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 LMAN1LQ9HAT1 526 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 KLHL33A6NCF5 533 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 TISP43B9A030 160 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 CDC7O00311 574 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 ABCB7O75027 752 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 SERPINE1P05121 402 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 PTPN6P29350 595 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 IL12AP29459 219 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 S100A10P60903 97 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 VBP1P61758 197 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 CMPK2Q5EBM0 449 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 DENND5AQ6IQ26 1287 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 GDPD4Q6W3E5 623 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 DEFB107AQ8IZN7 70 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 KIAA0895Q8NCT3 520 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 PIK3C3Q8NEB9 887 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 GRHL3Q8TE85 626 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 TCEAL3Q969E4 200 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 IRF2BPLQ9H1B7 796 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 TPRKBQ9Y3C4 175 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 EML1O00423 815 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 WNT9AO14904 365 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 MMP20O60882 483 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 JUNDP17535 347 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 SEMA5AQ13591 1074 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 DGUOKQ16854 277 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 SLC25A25Q6KCM7 469 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 PIGWQ7Z7B1 504 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 MMABQ96EY8 250 aaPredicted RBP10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 C8orf48Q96LL4 319 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 OR52E6Q96RD3 313 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 COMMD4Q9H0A8 199 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 TIGARQ9NQ88 270 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 HIF1ANQ9NWT6 349 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 IRAK3Q9Y616 596 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 ANKRD34BA5PLL1 514 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 KLRC4O43908 158 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 RGS6P49758 472 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 UBE2NP61088 152 aaKnown RBP10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 EEF1A2Q05639 463 aaKnown RBP10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 EXOC3L2Q2M3D2 409 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 RABEPKQ7Z6M1 372 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 MAP4K3Q8IVH8 894 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 DEFB123Q8N688 67 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 OSBPL7Q9BZF2 842 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 TAS2R14Q9NYV8 317 aa10.77□□□□□ -0.69
CACNA1C-216ENST00000399638 PRR5-ARHGAP8B1AHC4 643 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 ABCA11PQ4W5N1 156 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 FAM76BQ5HYJ3 339 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 NPLQ9BXD5 320 aaPredicted RBP10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 EURLQ9NYK6 297 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 EIF3KQ9UBQ5 218 aaKnown RBP10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 ADAM18Q9Y3Q7 739 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 MRC1P22897 1456 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 C5orf51A6NDU8 294 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 NPIPA2E9PIF3 369 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 NPIPA3F8WFD2 350 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 SAP18O00422 153 aaKnown RBP10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 CLRN1P58418 232 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 NRF1Q16656 503 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 HKDC1Q2TB90 917 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 GPAT4Q86UL3 456 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 ADHFE1Q8IWW8 467 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 DHRSXQ8N5I4 330 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 CLEC1AQ8NC01 280 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 TDRD1Q9BXT4 1180 aaKnown RBP10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 C8orf33Q9H7E9 229 aaPredicted RBP10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 AP3M1Q9Y2T2 418 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 YIPF1Q9Y548 306 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 A0A1B0GV50 99 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 TCRBV5S4A2TA0A5A2 114 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 L7N2F9 121 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 RECQL5O94762 991 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms