RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 TRPS1Q9UHF7 1281 aa18.51■□□□□ 0.55
TSPAN4-204ENST00000397404 TRIM33Q9UPN9 1127 aa18.51■□□□□ 0.55
TSPAN4-204ENST00000397404 PCYT1BQ9Y5K3 369 aaPredicted RBP18.51■□□□□ 0.55
TSPAN4-204ENST00000397404 TECTAO75443 2155 aa18.5■□□□□ 0.55
TSPAN4-204ENST00000397404 PDZK1P1A8MUH7 402 aa18.5■□□□□ 0.55
TSPAN4-204ENST00000397404 CCDC22O60826 627 aa18.5■□□□□ 0.55
TSPAN4-204ENST00000397404 F3P13726 295 aa18.5■□□□□ 0.55
TSPAN4-204ENST00000397404 AGTR2P50052 363 aa18.5■□□□□ 0.55
TSPAN4-204ENST00000397404 PNLIPRP1P54315 467 aa18.5■□□□□ 0.55
TSPAN4-204ENST00000397404 INHBCP55103 352 aa18.5■□□□□ 0.55
TSPAN4-204ENST00000397404 PTCHD3Q3KNS1 767 aa18.5■□□□□ 0.55
TSPAN4-204ENST00000397404 EPGNQ6UW88 154 aa18.5■□□□□ 0.55
TSPAN4-204ENST00000397404 ACAD11Q709F0 780 aa18.5■□□□□ 0.55
TSPAN4-204ENST00000397404 HID1Q8IV36 788 aa18.5■□□□□ 0.55
TSPAN4-204ENST00000397404 TEX9Q8N6V9 391 aa18.5■□□□□ 0.55
TSPAN4-204ENST00000397404 C1orf216Q8TAB5 229 aa18.5■□□□□ 0.55
TSPAN4-204ENST00000397404 HMGCLL1Q8TB92 370 aa18.5■□□□□ 0.55
TSPAN4-204ENST00000397404 C12orf66Q96MD2 445 aa18.5■□□□□ 0.55
TSPAN4-204ENST00000397404 PKP4Q99569 1192 aa18.5■□□□□ 0.55
TSPAN4-204ENST00000397404 TMEM120AQ9BXJ8 343 aa18.5■□□□□ 0.55
TSPAN4-204ENST00000397404 ERVMER34-1Q9H9K5 563 aa18.5■□□□□ 0.55
TSPAN4-204ENST00000397404 KCNK13Q9HB14 408 aa18.5■□□□□ 0.55
TSPAN4-204ENST00000397404 TM9SF3Q9HD45 589 aa18.5■□□□□ 0.55
TSPAN4-204ENST00000397404 SEMA4BQ9NPR2 832 aaPredicted RBP18.5■□□□□ 0.55
TSPAN4-204ENST00000397404 PNPOQ9NVS9 261 aa18.5■□□□□ 0.55
TSPAN4-204ENST00000397404 DCTN4Q9UJW0 460 aa18.5■□□□□ 0.55
TSPAN4-204ENST00000397404 CA5BQ9Y2D0 317 aa18.5■□□□□ 0.55
TSPAN4-204ENST00000397404 KCNE2Q9Y6J6 123 aa18.5■□□□□ 0.55
TSPAN4-204ENST00000397404 BDP1A6H8Y1 2624 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 KIR2DS5A0A0G2JLQ3 304 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 A0A0G2JNG1 304 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 KIR2DS3K7RE56 304 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 WDR47O94967 919 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 SLC16A8O95907 504 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 CSF2P04141 144 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 KITP10721 976 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 CTSEP14091 401 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 NME1P15531 152 aaKnown RBP18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 MPSTP25325 297 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 IMPA1P29218 277 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 NUBP1P53384 320 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 CDH13P55290 713 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 SH3BP2P78314 561 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 KRT33BQ14525 404 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 KIR2DS5Q14953 304 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 ELOCQ15369 112 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 TBCCQ15814 346 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 ZSCAN26Q16670 478 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 CYP2A13Q16696 494 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 LIPJQ5W064 366 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 KANK2Q63ZY3 851 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 FRMD1Q8N878 549 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 DTWD2Q8NBA8 298 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 TSACCQ96A04 125 aaPredicted RBP18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 NECAB3Q96P71 396 aaPredicted RBP18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 LRRC37BQ96QE4 947 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 HAUS8Q9BT25 410 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 EHD1Q9H4M9 534 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 RABEP2Q9H5N1 569 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 KIR3DX1Q9H7L2 352 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 NOL11Q9H8H0 719 aaKnown RBP18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 ZNF395Q9H8N7 513 aaPredicted RBP18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 MEAF6Q9HAF1 191 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 ZBTB26Q9HCK0 441 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 MARCOQ9UEW3 520 aaPredicted RBP18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 KCNK6Q9Y257 313 aa18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 ZFC3H1O60293 1989 aaKnown RBP18.49■□□□□ 0.55
TSPAN4-204ENST00000397404 ATXN2Q99700 1313 aaKnown RBP18.48■□□□□ 0.55
TSPAN4-204ENST00000397404 ZNF195O14628 629 aa18.48■□□□□ 0.55
TSPAN4-204ENST00000397404 BCAT2O15382 392 aaPredicted RBP18.48■□□□□ 0.55
TSPAN4-204ENST00000397404 CLDN9O95484 217 aa18.48■□□□□ 0.55
TSPAN4-204ENST00000397404 PDGFBP01127 241 aaPredicted RBP18.48■□□□□ 0.55
TSPAN4-204ENST00000397404 MTHFD1P11586 935 aaKnown RBP18.48■□□□□ 0.55
TSPAN4-204ENST00000397404 GNAZP19086 355 aa18.48■□□□□ 0.55
TSPAN4-204ENST00000397404 ACTR1BP42025 376 aa18.48■□□□□ 0.55
TSPAN4-204ENST00000397404 C21orf59P57076 290 aa18.48■□□□□ 0.55
TSPAN4-204ENST00000397404 ACTR1AP61163 376 aa18.48■□□□□ 0.55
TSPAN4-204ENST00000397404 HNRNPKP61978 463 aaKnown RBP eCLIP18.48■□□□□ 0.558e-6■■■■□ 19.7
TSPAN4-204ENST00000397404 EIF2B5Q13144 721 aaKnown RBP18.48■□□□□ 0.55
TSPAN4-204ENST00000397404 MILR1Q7Z6M3 343 aa18.48■□□□□ 0.55
TSPAN4-204ENST00000397404 YTHDF3Q7Z739 585 aaKnown RBP18.48■□□□□ 0.55
TSPAN4-204ENST00000397404 SYTL1Q8IYJ3 562 aa18.48■□□□□ 0.55
TSPAN4-204ENST00000397404 PHACTR4Q8IZ21 702 aa18.48■□□□□ 0.55
TSPAN4-204ENST00000397404 ACTRT2Q8TDY3 377 aa18.48■□□□□ 0.55
TSPAN4-204ENST00000397404 MAELQ96JY0 434 aaKnown RBP18.48■□□□□ 0.55
TSPAN4-204ENST00000397404 SGPP1Q9BX95 441 aa18.48■□□□□ 0.55
TSPAN4-204ENST00000397404 CCDC177Q9NQR7 707 aaPredicted RBP18.48■□□□□ 0.55
TSPAN4-204ENST00000397404 LRP4O75096 1905 aa18.48■□□□□ 0.55
TSPAN4-204ENST00000397404 ANKRD12Q6UB98 2062 aa18.47■□□□□ 0.55
TSPAN4-204ENST00000397404 UBFD1O14562 309 aaKnown RBP18.47■□□□□ 0.55
TSPAN4-204ENST00000397404 CLGNO14967 610 aa18.47■□□□□ 0.55
TSPAN4-204ENST00000397404 RPL10P27635 214 aaKnown RBP18.47■□□□□ 0.55
TSPAN4-204ENST00000397404 HNF4AP41235 474 aa18.47■□□□□ 0.55
TSPAN4-204ENST00000397404 CASP2P42575 452 aa18.47■□□□□ 0.55
TSPAN4-204ENST00000397404 BDKRB1P46663 353 aa18.47■□□□□ 0.55
TSPAN4-204ENST00000397404 RAB28P51157 221 aa18.47■□□□□ 0.55
TSPAN4-204ENST00000397404 RPE65Q16518 533 aa18.47■□□□□ 0.55
TSPAN4-204ENST00000397404 LYSMD4Q5XG99 296 aa18.47■□□□□ 0.55
TSPAN4-204ENST00000397404 PMS2CLQ68D20 193 aa18.47■□□□□ 0.55
TSPAN4-204ENST00000397404 GKN2Q86XP6 184 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms