RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 EBLN1P0CF75 366 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 ACP5P13686 325 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 AGTRAPQ6RW13 159 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 GALNT13Q8IUC8 556 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 OR5K2Q8NHB8 316 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 ZNF480Q8WV37 535 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 RILPQ96NA2 401 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 CCL27Q9Y4X3 112 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 PIP5K1BO14986 540 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 SKAP2O75563 359 aaPredicted RBP12.36□□□□□ -0.43
TRIM39-204ENST00000396548 FSBPO95073 299 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 DCNP07585 359 aaKnown RBP12.36□□□□□ -0.43
TRIM39-204ENST00000396548 AOC1P19801 751 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 PIK3CGP48736 1102 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 UBAP2LQ14157 1087 aaKnown RBP12.36□□□□□ -0.43
TRIM39-204ENST00000396548 GGTA1PQ4G0N0 100 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 Q6ZSR6 202 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 L3MBTL4Q8NA19 623 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 CADM4Q8NFZ8 388 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 OR13H1Q8NG92 308 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 OR5AR1Q8NGP9 310 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 OR9A1PQ8NGU1 263 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 PPP1R36Q96LQ0 422 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 SGPP1Q9BX95 441 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 ARL8BQ9NVJ2 186 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 ARMCX1Q9P291 453 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 TRPS1Q9UHF7 1281 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 TIMM22Q9Y584 194 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 DGKBQ9Y6T7 804 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 ENO1P06733 434 aaKnown RBP12.36□□□□□ -0.43
TRIM39-204ENST00000396548 EPB42P16452 691 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 MAP4P27816 1152 aaKnown RBP12.36□□□□□ -0.43
TRIM39-204ENST00000396548 GNPDA1P46926 289 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 RABIFP47224 123 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 PXNP49023 591 aaPredicted RBP12.36□□□□□ -0.43
TRIM39-204ENST00000396548 CLCA4Q14CN2 919 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 ALG11Q2TAA5 492 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 ENPP7Q6UWV6 458 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 ASRGL1Q7L266 308 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 NRROSQ86YC3 692 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 AFAP1L2Q8N4X5 818 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 ATL1Q8WXF7 558 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 PYCR2Q96C36 320 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 INSM2Q96T92 566 aaPredicted RBP12.36□□□□□ -0.43
TRIM39-204ENST00000396548 PCOLCE2Q9UKZ9 415 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 SLC22A14Q9Y267 594 aa12.36□□□□□ -0.43
TRIM39-204ENST00000396548 TNRC6BQ9UPQ9 1833 aaKnown RBP12.36□□□□□ -0.43
TRIM39-204ENST00000396548 METTL12A8MUP2 240 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 PI15O43692 258 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 TDGF1P13385 188 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 SCTRP47872 440 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 TCHHL1Q5QJ38 904 aaPredicted RBP12.35□□□□□ -0.43
TRIM39-204ENST00000396548 PHC3Q8NDX5 983 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 OR2T11Q8NH01 316 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 TFGQ92734 400 aaPredicted RBP12.35□□□□□ -0.43
TRIM39-204ENST00000396548 OR2M4Q96R27 311 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 ATG10Q9H0Y0 220 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 PSMD13Q9UNM6 376 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 FIS1Q9Y3D6 152 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 FANCMQ8IYD8 2048 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 A6NCN8 305 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 E9PBE3 544 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 KLHL41O60662 606 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 WFS1O76024 890 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 WDR47O94967 919 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 UNC5CO95185 931 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 CAPN1P07384 714 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 CD1EP15812 388 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 KELP23276 732 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 CCNG1P51959 295 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 NCALDP61601 193 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 TMEM198Q66K66 360 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 WASH2PQ6VEQ5 465 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 ACAD11Q709F0 780 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 THOC6Q86W42 341 aaKnown RBP12.35□□□□□ -0.43
TRIM39-204ENST00000396548 DCBLD1Q8N8Z6 715 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 C1orf216Q8TAB5 229 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 HMGCLL1Q8TB92 370 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 SLC7A6OSQ96CW6 309 aaPredicted RBP12.35□□□□□ -0.43
TRIM39-204ENST00000396548 TWSG1Q9GZX9 223 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 AKTIPQ9H8T0 292 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 WASH6PQ9NQA3 447 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 DNAJC11Q9NVH1 559 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 SCHIP1Q9P0W5 487 aaPredicted RBP12.35□□□□□ -0.43
TRIM39-204ENST00000396548 CIDEBQ9UHD4 219 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 KCNK6Q9Y257 313 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 RNF11Q9Y3C5 154 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 GPSM3Q9Y4H4 160 aa12.35□□□□□ -0.43
TRIM39-204ENST00000396548 SERTM1A2A2V5 107 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 PRR5-ARHGAP8B1AHC4 643 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 HGFP14210 728 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 RPL10P27635 214 aaKnown RBP12.34□□□□□ -0.43
TRIM39-204ENST00000396548 HOXA6P31267 233 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 SRP54P61011 504 aaKnown RBP12.34□□□□□ -0.43
TRIM39-204ENST00000396548 CTBSQ01459 385 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 DMWDQ09019 674 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 EIF2B5Q13144 721 aaKnown RBP12.34□□□□□ -0.43
TRIM39-204ENST00000396548 CYP2A13Q16696 494 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 MILR1Q7Z6M3 343 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 DCUN1D3Q8IWE4 304 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 189.1 ms