RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 FAM151BQ6UXP7 276 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 ZNF783Q6ZMS7 281 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 HIPK1Q86Z02 1210 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 RBFAQ8N0V3 343 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 UBE2J2Q8N2K1 259 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 NATD1Q8N6N6 113 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 CELF5Q8N6W0 485 aaKnown RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 OR5H6Q8NGV6 325 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 FBXO30Q8TB52 745 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 PHOSPHO2Q8TCD6 241 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 MCOLN3Q8TDD5 553 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 SLC22A17Q8WUG5 538 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 AKAP1Q92667 903 aaKnown RBP eCLIP5.58□□□□□ -1.528e-7■■■■□ 21.7
RFFL-202ENST00000394597 NT5C3BQ969T7 300 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 CCDC120Q96HB5 630 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 NPLQ9BXD5 320 aaPredicted RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 UGT2B28Q9BY64 529 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 MROQ9BYG7 248 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 FAM126AQ9BYI3 521 aaPredicted RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 ZFP14Q9HCL3 533 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 ZNF304Q9HCX3 659 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 SMOXQ9NWM0 555 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 TMEM216Q9P0N5 145 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 SIRPGQ9P1W8 387 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 DOCK5Q9H7D0 1870 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 ZNFX1Q9P2E3 1918 aaKnown RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 A0A0D9SEW6 157 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 TTC24A2A3L6 582 aaPredicted RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 PIPSLA2A3N6 862 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 H0YJX3 145 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 KPNA5O15131 536 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 KATNA1O75449 491 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 GUCA1CO95843 209 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 GOT2P00505 430 aaKnown RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 CXCL10P02778 98 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 PKMP14618 531 aaKnown RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 ATF6P18850 670 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 CYP2A7P20853 494 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 GLDCP23378 1020 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 FSHRP23945 695 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 PBLDP30039 288 aaPredicted RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 SLC15A1P46059 708 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 RPL34P49207 117 aaKnown RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.58□□□□□ -1.52
RFFL-202ENST00000394597 CD300CQ08708 224 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 ANGPT1Q15389 498 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 POM121L1PQ3SYA9 428 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 TIMM50Q3ZCQ8 353 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 ATP6AP1LQ52LC2 224 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 SIRPB2Q5JXA9 342 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 LIPMQ5VYY2 423 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 USP43Q70EL4 1123 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 FAM9CQ8IZT9 166 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 LRRC17Q8N6Y2 441 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 NPWQ8N729 165 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 OR56A4Q8NGH8 313 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 CXorf40AQ8TE69 158 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 COPS8Q99627 209 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 IL12RB2Q99665 862 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 SLC29A1Q99808 456 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 OMDQ99983 421 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 FEM1AQ9BSK4 669 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 SOX17Q9H6I2 414 aaPredicted RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 ACTR3BQ9P1U1 418 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 ZNF222Q9UK12 451 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 CNOT11Q9UKZ1 510 aaKnown RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 NCKAP1Q9Y2A7 1128 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 UGT2A1Q9Y4X1 527 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 NME7Q9Y5B8 376 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 TNPO3Q9Y5L0 923 aaKnown RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 PEX16Q9Y5Y5 336 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 PRMT5O14744 637 aaPredicted RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 ADAM12O43184 909 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 ALX3O95076 343 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 MATN1P21941 496 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 UQCRC1P31930 480 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 ALDH3B2P48448 385 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 PPP5CP53041 499 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 C1QTNF8P60827 252 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 RHAGQ02094 409 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 NRG1Q02297 640 aaPredicted RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 CACNG1Q06432 222 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 OLIG2Q13516 323 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 BOP1Q14137 746 aaKnown RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 HIST2H2ACQ16777 129 aaPredicted RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 PFKFB4Q16877 469 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 CARD16Q5EG05 197 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 ARL13AQ5H913 290 aaPredicted RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 TPRG1LQ5T0D9 272 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 HIST2H2AA3Q6FI13 130 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 PIWIL4Q7Z3Z4 852 aaKnown RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 DENND6AQ8IWF6 608 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 TP53INP2Q8IXH6 220 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 CMTM8Q8IZV2 173 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 CENPLQ8N0S6 344 aaPredicted RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 MIER2Q8N344 545 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 SDR16C5Q8N3Y7 309 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 SPATA6LQ8N4H0 392 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 WFIKKN2Q8TEU8 576 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 LINC01599Q8WXQ3 324 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms