RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 ELP5Q8TE02 316 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 ERVK-11Q9UQG0 969 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 C9J4A7 227 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 VIPP01282 170 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 CRYBG2Q8N1P7 616 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 C12orf45Q8N5I9 185 aaPredicted RBP14.48□□□□□ -0.09
CCDC50-201ENST00000392455 TMEM145Q8NBT3 493 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 AENQ8WTP8 325 aaKnown RBP14.48□□□□□ -0.09
CCDC50-201ENST00000392455 AGAP2Q99490 1192 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 SCN8AQ9UQD0 1980 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 M0R233 179 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 HDCP19113 662 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 RPIAP49247 311 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 GPR65Q8IYL9 337 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 ZNF101Q8IZC7 436 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 ZNF676Q8N7Q3 588 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 BAP1Q92560 729 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 ZNF570Q96NI8 536 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 COPS4Q9BT78 406 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 KCNQ5Q9NR82 932 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 ZNF490Q9ULM2 529 aaPredicted RBP14.47□□□□□ -0.09
CCDC50-201ENST00000392455 EDARQ9UNE0 448 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 B3GALT2O43825 422 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 ITGA5P08648 1049 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 SMIM10L2AP0DMW4 78 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 SMIM10L2BP0DMW5 78 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 ANXA8P13928 327 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 SLC6A9P48067 706 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 LSM14AQ8ND56 463 aaKnown RBP14.47□□□□□ -0.09
CCDC50-201ENST00000392455 COPS5Q92905 334 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 RAD9AQ99638 391 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 ACTR3BQ9P1U1 418 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 MRPS17Q9Y2R5 130 aaKnown RBP14.47□□□□□ -0.09
CCDC50-201ENST00000392455 CLCA4Q14CN2 919 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 DUPD1Q68J44 220 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 ZNF808Q8N4W9 903 aaPredicted RBP14.47□□□□□ -0.09
CCDC50-201ENST00000392455 TMEM199Q8N511 208 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 SLC27A5Q9Y2P5 690 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 PEX11AO75192 247 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 BCKDHAP12694 445 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 SLC26A5P58743 744 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 LRRN1Q6UXK5 716 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 CHST7Q9NS84 486 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 PLK2Q9NYY3 685 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 COPZ2Q9P299 210 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 MRPS23Q9Y3D9 190 aaKnown RBP14.47□□□□□ -0.09
CCDC50-201ENST00000392455 PCDHB11Q9Y5F2 797 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 A0A1W2PRQ8 180 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 OR2AG2A6NM03 316 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 TISP43B9A030 160 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 GRM6O15303 877 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 NT5EP21589 574 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 RIDAP52758 137 aaKnown RBP14.47□□□□□ -0.09
CCDC50-201ENST00000392455 MAMLD1Q13495 774 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 BLMHQ13867 455 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 KCTD19Q17RG1 926 aaPredicted RBP14.47□□□□□ -0.09
CCDC50-201ENST00000392455 CXCL17Q6UXB2 119 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 CEP68Q76N32 757 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 P4HA3Q7Z4N8 544 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 LIX1Q8N485 282 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 PLEKHA3Q9HB20 300 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 FER1L4A9Z1Z3 1794 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 C8BP07358 591 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 SMSP52788 366 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 VGLL4Q14135 290 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 MED27Q6P2C8 311 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 SULT4A1Q9BR01 284 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 TNS2Q63HR2 1409 aa14.47□□□□□ -0.09
CCDC50-201ENST00000392455 TEX13DA0A0J9YY54 714 aaPredicted RBP14.46□□□□□ -0.09
CCDC50-201ENST00000392455 COQ9O75208 318 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 RCBTB2O95199 551 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 ZFPM1Q8IX07 1006 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 OR10G6Q8NH81 332 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 OSTF1Q92882 214 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 LPPQ93052 612 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 ZNF649Q9BS31 505 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 CHIAQ9BZP6 476 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 SLC6A16Q9GZN6 736 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 S100A14Q9HCY8 104 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 MKS1Q9NXB0 559 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 GPRC5BQ9NZH0 403 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 VEGFCP49767 419 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 EARS2Q5JPH6 523 aaKnown RBP14.46□□□□□ -0.09
CCDC50-201ENST00000392455 GPC2Q8N158 579 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 TM9SF2Q99805 663 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 STRA6Q9BX79 667 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 SLIT1O75093 1534 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 PDLIM1O00151 329 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 POLR1CO15160 346 aaPredicted RBP14.46□□□□□ -0.09
CCDC50-201ENST00000392455 RAD51DO75771 328 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 TSPAN8P19075 237 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 CRHR1P34998 444 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 CD47Q08722 323 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 TOP1MTQ969P6 601 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 ZNF514Q96K75 400 aaPredicted RBP14.46□□□□□ -0.09
CCDC50-201ENST00000392455 TBC1D17Q9HA65 648 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 POLR3HQ9Y535 204 aaPredicted RBP14.46□□□□□ -0.09
CCDC50-201ENST00000392455 BTNL10A8MVZ5 291 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 AGPSO00116 658 aa14.46□□□□□ -0.09
CCDC50-201ENST00000392455 STK16O75716 305 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms