RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 EVA1AQ9H8M9 152 aa5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 SPHK1Q9NYA1 384 aa5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 TXNDC16Q9P2K2 825 aa5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 FAF1Q9UNN5 650 aaPredicted RBP5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 CTAGE9A4FU28 777 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 C5orf60A6NFR6 353 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 E9PI62 339 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 C16orf97H3BN30 126 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 ACOT8O14734 319 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 CAPN9O14815 690 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 IFIT3O14879 490 aaKnown RBP5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 SLC28A2O43868 658 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 CTSVO60911 334 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 PGLSO95336 258 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 NTN1O95631 604 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 IGHV4-39P01824 125 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 FAM58BPP0C7Q3 252 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 CTAGE8P0CG41 777 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 SMIM18P0DKX4 95 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 HAPLN1P10915 354 aaPredicted RBP5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 IRF2P14316 349 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 GNAZP19086 355 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 DGKAP23743 735 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 TNFRSF8P28908 595 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 EPHA2P29317 976 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 TCF7P36402 384 aaPredicted RBP5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 THOP1P52888 689 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 DLK1P80370 383 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 DMPKQ09013 629 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 RRS1Q15050 365 aaKnown RBP5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 E2F5Q15329 346 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 MCMDC2Q4G0Z9 681 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 SPOUT1Q5T280 376 aaKnown RBP5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 CORO6Q6QEF8 472 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 ARMC9Q7Z3E5 817 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 ZNF554Q86TJ5 538 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 CTAGE4Q8IX94 777 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 CDK20Q8IZL9 346 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 MAB21L3Q8N8X9 362 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 ATAD1Q8NBU5 361 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 OR13J1Q8NGT2 312 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 SORCS1Q8WY21 1168 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 DESI2Q9BSY9 194 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 MLPHQ9BV36 600 aaPredicted RBP5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 Q9N2K0 584 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 ECHDC1Q9NTX5 307 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 DNAJB9Q9UBS3 223 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 MTUS1Q9ULD2 1270 aa5.08□□□□□ -1.6
RNU6-40P-201ENST00000384254 PCDH11YQ9BZA8 1340 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 A0A0U1RQK1 487 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 A0A1W2PPW3 197 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 ZNF320A2RRD8 509 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 SLC7A4O43246 635 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 RPS6KA5O75582 802 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 CSN3P07498 182 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 ZFYP08048 801 aaPredicted RBP5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 SNRNP70P08621 437 aaKnown RBP5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 SUPT20HL2P0C7V6 817 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 EPCAMP16422 314 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 ZNF132P52740 706 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 NANOS2P60321 138 aaKnown RBP5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 TUBB4BP68371 445 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 VEZF1Q14119 521 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 TAF13Q15543 124 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 FAM174BQ3ZCQ3 159 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 SPSB3Q6PJ21 355 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 ZNF852Q6ZMS4 543 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 HOOK3Q86VS8 718 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 SNX32Q86XE0 403 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 ZDHHC17Q8IUH5 632 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 FAM219AQ8IW50 185 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 CCDC170Q8IYT3 715 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 NAGSQ8N159 534 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 THAP8Q8NA92 274 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 NPEPL1Q8NDH3 523 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 DMBX1Q8NFW5 382 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 OR13A1Q8NGR1 328 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 CTCFLQ8NI51 663 aaPredicted RBP5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 ZNF473Q8WTR7 871 aaKnown RBP5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 HEXDCQ8WVB3 486 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 IRGQQ8WZA9 623 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 NSMAFQ92636 917 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 PROX1Q92786 737 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 CORO2AQ92828 525 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 EXOC4Q96A65 974 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 SCRN2Q96FV2 425 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 C17orf77Q96MU5 243 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 RTP3Q9BQQ7 232 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 SNX25Q9H3E2 840 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 RETREG1Q9H6L5 497 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 DDX31Q9H8H2 851 aaKnown RBP5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 ZBTB20Q9HC78 741 aaPredicted RBP5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 ITGA11Q9UKX5 1188 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 CDH7Q9ULB5 785 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 KCNK7Q9Y2U2 307 aa5.07□□□□□ -1.6
RNU6-40P-201ENST00000384254 PRAC2D3DTV9 90 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 FAM86B1E9PN63 330 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 TULP2O00295 520 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 PPP1R3DO95685 299 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms