RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 MROH6A6NGR9 719 aa17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 BTNL10A8MVZ5 291 aa17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 F8W8V4 182 aa17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 HCRTR1O43613 425 aa17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 KRT86O43790 486 aa17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 OR56A5P0C7T3 313 aa17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 TPBGLP0DKB5 382 aa17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 TPH1P17752 444 aa17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 MSNP26038 577 aaKnown RBP17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 POU6F1Q14863 301 aa17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 P3H1Q32P28 736 aa17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 NKAIN1Q4KMZ8 207 aa17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 CRB2Q5IJ48 1285 aa17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 ZADH2Q8N4Q0 377 aa17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 CISD2Q8N5K1 135 aaKnown RBP17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 ZNF655Q8N720 491 aaPredicted RBP17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 DENND1AQ8TEH3 1009 aa17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 BARD1Q99728 777 aaKnown RBP17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 NDC1Q9BTX1 674 aa17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 ILKAPQ9H0C8 392 aaPredicted RBP17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 ATP13A2Q9NQ11 1180 aa17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 DHCR7Q9UBM7 475 aaKnown RBP17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 ERRFI1Q9UJM3 462 aaPredicted RBP17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 CDYLQ9Y232 598 aa17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 TDRKHQ9Y2W6 561 aaKnown RBP17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 PRSS21Q9Y6M0 314 aa17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 PCM1Q15154 2024 aa17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 CCDC88CQ9P219 2028 aa17.23■□□□□ 0.35
RPUSD3-201ENST00000383820 DOPEY1Q5JWR5 2465 aa17.22■□□□□ 0.35
RPUSD3-201ENST00000383820 GOLGA6L9A6NEM1 432 aa17.22■□□□□ 0.35
RPUSD3-201ENST00000383820 BHMG1C9JSJ3 638 aaPredicted RBP17.22■□□□□ 0.35
RPUSD3-201ENST00000383820 METTL18O95568 372 aa17.22■□□□□ 0.35
RPUSD3-201ENST00000383820 LDLRP01130 860 aa17.22■□□□□ 0.35
RPUSD3-201ENST00000383820 FOXN2P32314 431 aa17.22■□□□□ 0.35
RPUSD3-201ENST00000383820 CYP2A13Q16696 494 aa17.22■□□□□ 0.35
RPUSD3-201ENST00000383820 SYTL3Q4VX76 610 aa17.22■□□□□ 0.35
RPUSD3-201ENST00000383820 Q6ZS92 163 aa17.22■□□□□ 0.35
RPUSD3-201ENST00000383820 PPP1R32Q7Z5V6 425 aa17.22■□□□□ 0.35
RPUSD3-201ENST00000383820 LINC00523Q86TU6 105 aa17.22■□□□□ 0.35
RPUSD3-201ENST00000383820 RNF214Q8ND24 703 aa17.22■□□□□ 0.35
RPUSD3-201ENST00000383820 ALG3Q92685 438 aa17.22■□□□□ 0.35
RPUSD3-201ENST00000383820 DLG3Q92796 817 aa17.22■□□□□ 0.35
RPUSD3-201ENST00000383820 FKBP10Q96AY3 582 aa17.22■□□□□ 0.35
RPUSD3-201ENST00000383820 TTC1Q99614 292 aa17.22■□□□□ 0.35
RPUSD3-201ENST00000383820 SLC5A6Q9Y289 635 aa17.22■□□□□ 0.35
RPUSD3-201ENST00000383820 COPG1Q9Y678 874 aaKnown RBP17.22■□□□□ 0.35
RPUSD3-201ENST00000383820 EPN1Q9Y6I3 576 aaPredicted RBP17.22■□□□□ 0.35
RPUSD3-201ENST00000383820 ANKRD12Q6UB98 2062 aa17.22■□□□□ 0.35
RPUSD3-201ENST00000383820 NUP210LQ5VU65 1888 aa17.21■□□□□ 0.35
RPUSD3-201ENST00000383820 CCDC78A2IDD5 438 aa17.21■□□□□ 0.35
RPUSD3-201ENST00000383820 ISM1B1AKI9 464 aa17.21■□□□□ 0.35
RPUSD3-201ENST00000383820 AGPSO00116 658 aa17.21■□□□□ 0.35
RPUSD3-201ENST00000383820 CNOT3O75175 753 aaKnown RBP17.21■□□□□ 0.35
RPUSD3-201ENST00000383820 IPO7O95373 1038 aaKnown RBP17.21■□□□□ 0.35
RPUSD3-201ENST00000383820 ONECUT2O95948 504 aa17.21■□□□□ 0.35
RPUSD3-201ENST00000383820 UMODP07911 640 aa17.21■□□□□ 0.35
RPUSD3-201ENST00000383820 GCGRP47871 477 aa17.21■□□□□ 0.35
RPUSD3-201ENST00000383820 ARSFP54793 590 aa17.21■□□□□ 0.35
RPUSD3-201ENST00000383820 NAP1L1P55209 391 aaKnown RBP17.21■□□□□ 0.35
RPUSD3-201ENST00000383820 AIMP2Q13155 320 aaKnown RBP17.21■□□□□ 0.35
RPUSD3-201ENST00000383820 ELOAQ14241 798 aaKnown RBP17.21■□□□□ 0.35
RPUSD3-201ENST00000383820 BRD3Q15059 726 aa17.21■□□□□ 0.35
RPUSD3-201ENST00000383820 DNAJC21Q5F1R6 531 aaKnown RBP17.21■□□□□ 0.35
RPUSD3-201ENST00000383820 AADACL2Q6P093 401 aa17.21■□□□□ 0.35
RPUSD3-201ENST00000383820 MICALCLQ6ZW33 695 aa17.21■□□□□ 0.35
RPUSD3-201ENST00000383820 FAM71DQ8N9W8 422 aa17.21■□□□□ 0.35
RPUSD3-201ENST00000383820 C5orf34Q96MH7 638 aa17.21■□□□□ 0.35
RPUSD3-201ENST00000383820 IRAK4Q9NWZ3 460 aa17.21■□□□□ 0.35
RPUSD3-201ENST00000383820 EURLQ9NYK6 297 aa17.21■□□□□ 0.35
RPUSD3-201ENST00000383820 RCCD1A6NED2 376 aa17.2■□□□□ 0.34
RPUSD3-201ENST00000383820 ANKUB1A6NFN9 424 aa17.2■□□□□ 0.34
RPUSD3-201ENST00000383820 CLDN1O95832 211 aa17.2■□□□□ 0.34
RPUSD3-201ENST00000383820 ALBP02768 609 aa17.2■□□□□ 0.34
RPUSD3-201ENST00000383820 CTSBP07858 339 aa17.2■□□□□ 0.34
RPUSD3-201ENST00000383820 PIM1P11309 404 aaPredicted RBP17.2■□□□□ 0.34
RPUSD3-201ENST00000383820 MMP11P24347 488 aa17.2■□□□□ 0.34
RPUSD3-201ENST00000383820 PEBP1P30086 187 aaKnown RBP17.2■□□□□ 0.34
RPUSD3-201ENST00000383820 PKLRP30613 574 aa17.2■□□□□ 0.34
RPUSD3-201ENST00000383820 RAB28P51157 221 aa17.2■□□□□ 0.34
RPUSD3-201ENST00000383820 LRRC57Q8N9N7 239 aa17.2■□□□□ 0.34
RPUSD3-201ENST00000383820 COG1Q8WTW3 980 aa17.2■□□□□ 0.34
RPUSD3-201ENST00000383820 INPP5DQ92835 1189 aa17.2■□□□□ 0.34
RPUSD3-201ENST00000383820 SLC22A18Q96BI1 424 aa17.2■□□□□ 0.34
RPUSD3-201ENST00000383820 TRIM5Q9C035 493 aa17.2■□□□□ 0.34
RPUSD3-201ENST00000383820 WDR54Q9H977 334 aa17.2■□□□□ 0.34
RPUSD3-201ENST00000383820 ENAMQ9NRM1 1142 aa17.2■□□□□ 0.34
RPUSD3-201ENST00000383820 SLC22A11Q9NSA0 550 aa17.2■□□□□ 0.34
RPUSD3-201ENST00000383820 RIMKLBQ9ULI2 386 aa17.2■□□□□ 0.34
RPUSD3-201ENST00000383820 PCDHGA10Q9Y5H3 936 aa17.2■□□□□ 0.34
RPUSD3-201ENST00000383820 CCDC162PA2VCL2 907 aa17.19■□□□□ 0.34
RPUSD3-201ENST00000383820 ERI2A8K979 691 aaKnown RBP17.19■□□□□ 0.34
RPUSD3-201ENST00000383820 SNRNP200O75643 2136 aaKnown RBP17.19■□□□□ 0.34
RPUSD3-201ENST00000383820 RPN2P04844 631 aa17.19■□□□□ 0.34
RPUSD3-201ENST00000383820 PTMAP06454 111 aaKnown RBP17.19■□□□□ 0.34
RPUSD3-201ENST00000383820 SLC9A5Q14940 896 aa17.19■□□□□ 0.34
RPUSD3-201ENST00000383820 YOD1Q5VVQ6 348 aaPredicted RBP17.19■□□□□ 0.34
RPUSD3-201ENST00000383820 OVCH1Q7RTY7 1134 aa17.19■□□□□ 0.34
RPUSD3-201ENST00000383820 SLC22A15Q8IZD6 547 aa17.19■□□□□ 0.34
RPUSD3-201ENST00000383820 SLC35B2Q8TB61 432 aa17.19■□□□□ 0.34
RPUSD3-201ENST00000383820 PPP4R1Q8TF05 950 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms