RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 FBXO47Q5MNV8 452 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 LRIF1Q5T3J3 769 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 OR2W6PQ8NHA6 318 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 ZNF566Q969W8 418 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 FDXACB1Q9BRP7 624 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 C1QTNF1Q9BXJ1 281 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 CELF4Q9BZC1 486 aaKnown RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 TRIM2Q9C040 744 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 TMEM117Q9H0C3 514 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 CATSPERZQ9NTU4 200 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 SPASTQ9UBP0 616 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 PCDHB1Q9Y5F3 818 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 MAU2Q9Y6X3 613 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 SOBPA7XYQ1 873 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 CASKO14936 926 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 SMAD6O43541 496 aaKnown RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 PCDHGA12O60330 932 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 DPM1O60762 260 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 APODP05090 189 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 IGFBP5P24593 272 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 PAX6P26367 422 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 CDC25CP30307 473 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 PTPN5P54829 565 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 RPS3AP61247 264 aaKnown RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 RPL6Q02878 288 aaKnown RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 RBBP4Q09028 425 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 APOFQ13790 326 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 TBCEQ15813 527 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 TPRG1LQ5T0D9 272 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 QSOX2Q6ZRP7 698 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 IRF2BP2Q7Z5L9 587 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 TMPRSS11BQ86T26 416 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 FSTL5Q8N475 847 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 FBXO39Q8N4B4 442 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 LRRN4CLQ8ND94 238 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 TTYH2Q9BSA4 534 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 PXMP2Q9NR77 195 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 ELOVL2Q9NXB9 296 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 RNF112Q9ULX5 631 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 TNFSF13BQ9Y275 285 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 BTRCQ9Y297 605 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 CRYL1Q9Y2S2 319 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 REXO2Q9Y3B8 237 aaKnown RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 ATRNL1Q5VV63 1379 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 KANTRA0A1W2PQU2 76 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 EME2A4GXA9 379 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 CYP26A1O43174 497 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 KERAO60938 352 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 SULT1C4O75897 302 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 FABP3P05413 133 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 DHRS4L1P0CG22 281 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 CD53P19397 219 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 TBX4P57082 545 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 DCDC1P59894 354 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 ILF3Q12906 894 aaKnown RBP eCLIP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 KIAA0930Q6ICG6 404 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 TYW3Q6IPR3 259 aaKnown RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 CCDC71Q8IV32 467 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 POMGNT2Q8NAT1 580 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 ZNF540Q8NDQ6 660 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 SLC35B2Q8TB61 432 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 KCNN1Q92952 543 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 MSANTD3Q96H12 275 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 COG8Q96MW5 612 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 NMUR2Q9GZQ4 415 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 DSN1Q9H410 356 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 UCKL1Q9NWZ5 548 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 ZMYM5Q9UJ78 669 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 FOXN1O15353 648 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 PLIN3O60664 434 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 DLDP09622 509 aaKnown RBP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 SMIM10L2AP0DMW4 78 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 SMIM10L2BP0DMW5 78 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 ENDOUP21128 410 aaKnown RBP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 TAGLN2P37802 199 aaKnown RBP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 GPR143P51810 404 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 EPHA5P54756 1037 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 RANP62826 216 aaKnown RBP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 PCK2Q16822 640 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 SYVN1Q86TM6 617 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 ZNF669Q96BR6 464 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 SLC7A6OSQ96CW6 309 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 PFDN5Q99471 154 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 ZNF717Q9BY31 904 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 NDUFAF4Q9P032 175 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 NUBP2Q9Y5Y2 271 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 WNK2Q9Y3S1 2297 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 A0A1B0GVC2 190 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 AGRPO00253 132 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 INPP4BO15327 924 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 CHRNA1P02708 482 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 KCNC3Q14003 757 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 E2F2Q14209 437 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 PTCHD3Q3KNS1 767 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 MEIOBQ8N635 442 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 OR13J1Q8NGT2 312 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 SLC13A3Q8WWT9 602 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 GIMAP5Q96F15 307 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 SMARCD1Q96GM5 515 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 CPB2Q96IY4 423 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms