RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 EID2BQ96D98 161 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 MTFMTQ96DP5 389 aaKnown RBP15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 BOCQ9BWV1 1114 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 GPN2Q9H9Y4 310 aaPredicted RBP15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 GSNP06396 782 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 MBOAT1Q6ZNC8 495 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 HDAC2Q92769 488 aaKnown RBP15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 RHBDF1Q96CC6 855 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 NRBF2Q96F24 287 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 TMEM175Q9BSA9 504 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 FEM1AQ9BSK4 669 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 VNN3Q9NY84 501 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 DNAJB9Q9UBS3 223 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 PKP3Q9Y446 797 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 CCL27Q9Y4X3 112 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 ARNTLO00327 626 aa15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 GMNNO75496 209 aa15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 PARNO95453 639 aaKnown RBP15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 CD160O95971 181 aa15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 URODP06132 367 aa15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 TTPAP49638 278 aa15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 RBM48Q5RL73 367 aaKnown RBP15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 PTRHD1Q6GMV3 140 aaKnown RBP15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 ANKRD46Q86W74 232 aa15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 CNDP2Q96KP4 475 aaKnown RBP15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 CWH43Q9H720 699 aa15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 SLC1A7O00341 560 aa15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 E2F6O75461 281 aa15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 NPPAP01160 153 aa15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 CR2P20023 1033 aa15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 VEGFBP49765 207 aa15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 FPGSQ05932 587 aa15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 SMARCB1Q12824 385 aa15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 SUSD1Q6UWL2 747 aa15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 DET1Q7L5Y6 550 aa15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 LIX1Q8N485 282 aa15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 ZNF555Q8NEP9 628 aa15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 KCNJ9Q92806 393 aa15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 KLF16Q9BXK1 252 aaPredicted RBP15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 ALOXE3Q9BYJ1 711 aa15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 GNPTGQ9UJJ9 305 aa15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 RIMKLBQ9ULI2 386 aa15.91■□□□□ 0.14
NKX3-1-201ENST00000380871 CXCR6O00574 342 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 AREL1O15033 823 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 JAK1P23458 1154 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 CTF1Q16619 201 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 MAPKAPK3Q16644 382 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 ZNF558Q96NG5 402 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 CDK5RAP1Q96SZ6 601 aaKnown RBP15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 MYOCQ99972 504 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 TMEM39AQ9NV64 488 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 KLQ9UEF7 1012 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 LOC100130705A0A1B0GUX0 176 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 TAPBPO15533 448 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 FFAR2O15552 330 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 DCTP40126 519 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 MAP2K4P45985 399 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 EPHB3P54753 998 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 ISL1P61371 349 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 IL1RL1Q01638 556 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 PHKG1Q16816 387 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 TTC23Q5W5X9 447 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 GALNT10Q86SR1 603 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 SLC22A15Q8IZD6 547 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 OR8J3Q8NGG0 315 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 NETO1Q8TDF5 533 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 MUL1Q969V5 352 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 PLD4Q96BZ4 506 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 UGT2B28Q9BY64 529 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 CFAP97Q9P2B7 532 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 TMEM247A6NEH6 219 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 SOBPA7XYQ1 873 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 CLDN7O95471 211 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 PCMT1P22061 227 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 CDH3P22223 829 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 FMO3P31513 532 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 RAPSNQ13702 412 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 PON2Q15165 354 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 ARMC12Q5T9G4 340 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 LAIR1Q6GTX8 287 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 NDNFQ8TB73 568 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 C2orf15Q8WU43 125 aaKnown RBP15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 SKA2Q8WVK7 121 aaPredicted RBP15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 SH3YL1Q96HL8 342 aaPredicted RBP15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 GORASP2Q9H8Y8 452 aa15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 TMEFF2Q9UIK5 374 aaPredicted RBP15.9■□□□□ 0.14
NKX3-1-201ENST00000380871 ELOVL7A1L3X0 281 aa15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 PITPNM1O00562 1244 aa15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 SERPINA1P01009 418 aa15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 MYCLP1P12525 358 aaPredicted RBP15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 STK19P49842 368 aaPredicted RBP15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 IFITM3Q01628 133 aa15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 TUBA3CQ13748 450 aa15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 SPIDRQ14159 915 aa15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 OTOP2Q7RTS6 562 aa15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 ZFP90Q8TF47 636 aa15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 NODALQ96S42 347 aa15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 EGFL8Q99944 293 aa15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 CIPCQ9C0C6 399 aa15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 ASB8Q9H765 288 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms