RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 MAP4P27816 1152 aaKnown RBP12.29□□□□□ -0.44
SMN1-202ENST00000380707 CD1CP29017 333 aa12.29□□□□□ -0.44
SMN1-202ENST00000380707 GLRBP48167 497 aa12.29□□□□□ -0.44
SMN1-202ENST00000380707 EPHA4P54764 986 aa12.29□□□□□ -0.44
SMN1-202ENST00000380707 ATP6V0D1P61421 351 aa12.29□□□□□ -0.44
SMN1-202ENST00000380707 SIM1P81133 766 aaPredicted RBP12.29□□□□□ -0.44
SMN1-202ENST00000380707 SP140Q13342 867 aa12.29□□□□□ -0.44
SMN1-202ENST00000380707 FAM83EQ2M2I3 478 aa12.29□□□□□ -0.44
SMN1-202ENST00000380707 ISCA2Q86U28 154 aa12.29□□□□□ -0.44
SMN1-202ENST00000380707 CNPY4Q8N129 248 aa12.29□□□□□ -0.44
SMN1-202ENST00000380707 OR9A1PQ8NGU1 263 aa12.29□□□□□ -0.44
SMN1-202ENST00000380707 MAGEC3Q8TD91 643 aa12.29□□□□□ -0.44
SMN1-202ENST00000380707 MCOLN3Q8TDD5 553 aa12.29□□□□□ -0.44
SMN1-202ENST00000380707 DENND1AQ8TEH3 1009 aa12.29□□□□□ -0.44
SMN1-202ENST00000380707 IL17FQ96PD4 163 aa12.29□□□□□ -0.44
SMN1-202ENST00000380707 PKP4Q99569 1192 aa12.29□□□□□ -0.44
SMN1-202ENST00000380707 SRMSQ9H3Y6 488 aa12.29□□□□□ -0.44
SMN1-202ENST00000380707 ALG9Q9H6U8 611 aa12.29□□□□□ -0.44
SMN1-202ENST00000380707 NMRAL1Q9HBL8 299 aa12.29□□□□□ -0.44
SMN1-202ENST00000380707 OR6C74A6NCV1 312 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 RFPL3O75679 317 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 DKK1O94907 266 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 SLC16A8O95907 504 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 SYF2O95926 243 aaKnown RBP12.28□□□□□ -0.44
SMN1-202ENST00000380707 PROS1P07225 676 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 FTH1P19P0C7X4 201 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 COL6A2P12110 1019 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 CYP2A7P20853 494 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 RAB28P51157 221 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 GPLD1P80108 840 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 CFHR1Q03591 330 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 ILKQ13418 452 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 MBOAT1Q6ZNC8 495 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 USP53Q70EK8 1073 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 HDXQ7Z353 690 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 ADAMTSL2Q86TH1 951 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 TRABD2AQ86V40 505 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 AMIGO1Q86WK6 493 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 LINC01555Q8NAE3 123 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 ACMSDQ8TDX5 336 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 RSC1A1Q92681 617 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 KIAA1191Q96A73 305 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 CABS1Q96KC9 395 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 ABCG4Q9H172 646 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 LRRN3Q9H3W5 708 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 RDH14Q9HBH5 336 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 UTP6Q9NYH9 597 aaKnown RBP12.28□□□□□ -0.44
SMN1-202ENST00000380707 ATXN7L1Q9ULK2 861 aaPredicted RBP12.28□□□□□ -0.44
SMN1-202ENST00000380707 NOVA2Q9UNW9 492 aaKnown RBP12.28□□□□□ -0.44
SMN1-202ENST00000380707 PCDHGA1Q9Y5H4 931 aa12.28□□□□□ -0.44
SMN1-202ENST00000380707 FREM2Q5SZK8 3169 aa12.27□□□□□ -0.44
SMN1-202ENST00000380707 BTN3A3O00478 584 aa12.27□□□□□ -0.44
SMN1-202ENST00000380707 NTN3O00634 580 aaPredicted RBP12.27□□□□□ -0.44
SMN1-202ENST00000380707 RGS16O15492 202 aaPredicted RBP12.27□□□□□ -0.44
SMN1-202ENST00000380707 ZW10O43264 779 aa12.27□□□□□ -0.44
SMN1-202ENST00000380707 OPA1O60313 960 aa12.27□□□□□ -0.44
SMN1-202ENST00000380707 ENO2P09104 434 aaPredicted RBP12.27□□□□□ -0.44
SMN1-202ENST00000380707 AMD1P17707 334 aa12.27□□□□□ -0.44
SMN1-202ENST00000380707 KRT4P19013 534 aa12.27□□□□□ -0.44
SMN1-202ENST00000380707 PKLRP30613 574 aa12.27□□□□□ -0.44
SMN1-202ENST00000380707 CAPZBP47756 277 aa12.27□□□□□ -0.44
SMN1-202ENST00000380707 ACAP2Q15057 778 aa12.27□□□□□ -0.44
SMN1-202ENST00000380707 TMPRSS9Q7Z410 1059 aa12.27□□□□□ -0.44
SMN1-202ENST00000380707 ADGRF3Q8IZF5 1079 aa12.27□□□□□ -0.44
SMN1-202ENST00000380707 C4orf33Q8N1A6 199 aa12.27□□□□□ -0.44
SMN1-202ENST00000380707 C2orf73Q8N5S3 287 aaPredicted RBP12.27□□□□□ -0.44
SMN1-202ENST00000380707 OR10G6Q8NH81 332 aa12.27□□□□□ -0.44
SMN1-202ENST00000380707 ZNF480Q8WV37 535 aa12.27□□□□□ -0.44
SMN1-202ENST00000380707 NCSTNQ92542 709 aa12.27□□□□□ -0.44
SMN1-202ENST00000380707 AHCYL2Q96HN2 611 aaKnown RBP12.27□□□□□ -0.44
SMN1-202ENST00000380707 CCDC138Q96M89 665 aa12.27□□□□□ -0.44
SMN1-202ENST00000380707 NUDT22Q9BRQ3 303 aa12.27□□□□□ -0.44
SMN1-202ENST00000380707 CENPHQ9H3R5 247 aa12.27□□□□□ -0.44
SMN1-202ENST00000380707 HRASLS2Q9NWW9 162 aa12.27□□□□□ -0.44
SMN1-202ENST00000380707 ARL15Q9NXU5 204 aa12.27□□□□□ -0.44
SMN1-202ENST00000380707 OR6C2Q9NZP2 312 aa12.27□□□□□ -0.44
SMN1-202ENST00000380707 OARD1Q9Y530 152 aa12.27□□□□□ -0.44
SMN1-202ENST00000380707 UNC13CQ8NB66 2214 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 OR5K3A6NET4 321 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 AGPSO00116 658 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 DUX1O43812 170 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 KDM1AO60341 852 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 GUCA1CO95843 209 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 HIST1H2AGP0C0S8 130 aaPredicted RBP12.27□□□□□ -0.45
SMN1-202ENST00000380707 ERGP11308 486 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 HOXB3P14651 431 aaPredicted RBP12.27□□□□□ -0.45
SMN1-202ENST00000380707 POLR2CP19387 275 aaPredicted RBP12.27□□□□□ -0.45
SMN1-202ENST00000380707 HIST1H2ADP20671 130 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 IMPA1P29218 277 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 CSF2RBP32927 897 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 SHMT2P34897 504 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 PPM1FP49593 454 aaPredicted RBP12.27□□□□□ -0.45
SMN1-202ENST00000380707 AP1S2P56377 157 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 CLDN6P56747 220 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 PPP1CAP62136 330 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 E2F1Q01094 437 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 SLC18A2Q05940 514 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 SQSTM1Q13501 440 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 FASTKQ14296 549 aaKnown RBP12.27□□□□□ -0.45
SMN1-202ENST00000380707 TGFBIQ15582 683 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms