RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 FESP07332 822 aa21.04■□□□□ 0.96
TRIM54-202ENST00000380075 HIST1H2AGP0C0S8 130 aaPredicted RBP21.04■□□□□ 0.96
TRIM54-202ENST00000380075 SMIM18P0DKX4 95 aa21.04■□□□□ 0.96
TRIM54-202ENST00000380075 C7P10643 843 aa21.04■□□□□ 0.96
TRIM54-202ENST00000380075 HIST1H2ADP20671 130 aa21.04■□□□□ 0.96
TRIM54-202ENST00000380075 GDF5P43026 501 aa21.04■□□□□ 0.96
TRIM54-202ENST00000380075 PRKCQQ04759 706 aa21.04■□□□□ 0.96
TRIM54-202ENST00000380075 ZNF77Q15935 545 aa21.04■□□□□ 0.96
TRIM54-202ENST00000380075 SLC2A7Q6PXP3 512 aa21.04■□□□□ 0.96
TRIM54-202ENST00000380075 UBE2R2Q712K3 238 aaPredicted RBP21.04■□□□□ 0.96
TRIM54-202ENST00000380075 CENPNQ96H22 339 aaPredicted RBP21.04■□□□□ 0.96
TRIM54-202ENST00000380075 HIST1H2AHQ96KK5 128 aa21.04■□□□□ 0.96
TRIM54-202ENST00000380075 MAGEB10Q96LZ2 347 aaPredicted RBP21.04■□□□□ 0.96
TRIM54-202ENST00000380075 CGREF1Q99674 301 aa21.04■□□□□ 0.96
TRIM54-202ENST00000380075 CIB1Q99828 191 aa21.04■□□□□ 0.96
TRIM54-202ENST00000380075 HIST1H2AJQ99878 128 aa21.04■□□□□ 0.96
TRIM54-202ENST00000380075 H2AFJQ9BTM1 129 aa21.04■□□□□ 0.96
TRIM54-202ENST00000380075 INTS7Q9NVH2 962 aaKnown RBP21.04■□□□□ 0.96
TRIM54-202ENST00000380075 ZNF490Q9ULM2 529 aaPredicted RBP21.04■□□□□ 0.96
TRIM54-202ENST00000380075 SLC8A2Q9UPR5 921 aa21.04■□□□□ 0.96
TRIM54-202ENST00000380075 ERVW-1Q9UQF0 538 aa21.04■□□□□ 0.96
TRIM54-202ENST00000380075 PDE10AQ9Y233 779 aa21.04■□□□□ 0.96
TRIM54-202ENST00000380075 AP3M1Q9Y2T2 418 aa21.04■□□□□ 0.96
TRIM54-202ENST00000380075 PCDHB3Q9Y5E6 796 aa21.04■□□□□ 0.96
TRIM54-202ENST00000380075 TCRBV5S2A0A599 114 aa21.03■□□□□ 0.96
TRIM54-202ENST00000380075 TSPAN11A1L157 253 aa21.03■□□□□ 0.96
TRIM54-202ENST00000380075 POLR2EP19388 210 aaKnown RBP21.03■□□□□ 0.96
TRIM54-202ENST00000380075 AKT1P31749 480 aa21.03■□□□□ 0.96
TRIM54-202ENST00000380075 NNMTP40261 264 aa21.03■□□□□ 0.96
TRIM54-202ENST00000380075 VASPP50552 380 aaPredicted RBP21.03■□□□□ 0.96
TRIM54-202ENST00000380075 SEMG2Q02383 582 aa21.03■□□□□ 0.96
TRIM54-202ENST00000380075 KIAA0040Q15053 153 aa21.03■□□□□ 0.96
TRIM54-202ENST00000380075 CYP51A1Q16850 503 aa21.03■□□□□ 0.96
TRIM54-202ENST00000380075 FAM78AQ5JUQ0 283 aa21.03■□□□□ 0.96
TRIM54-202ENST00000380075 TBC1D21Q8IYX1 336 aa21.03■□□□□ 0.96
TRIM54-202ENST00000380075 FAM9CQ8IZT9 166 aa21.03■□□□□ 0.96
TRIM54-202ENST00000380075 MFSD2AQ8NA29 543 aa21.03■□□□□ 0.96
TRIM54-202ENST00000380075 CHST14Q8NCH0 376 aa21.03■□□□□ 0.96
TRIM54-202ENST00000380075 ASB11Q8WXH4 323 aa21.03■□□□□ 0.96
TRIM54-202ENST00000380075 HBEGFQ99075 208 aa21.03■□□□□ 0.96
TRIM54-202ENST00000380075 C9orf16Q9BUW7 83 aa21.03■□□□□ 0.96
TRIM54-202ENST00000380075 LRTM1Q9HBL6 345 aa21.03■□□□□ 0.96
TRIM54-202ENST00000380075 ANAPC2Q9UJX6 822 aa21.03■□□□□ 0.96
TRIM54-202ENST00000380075 RNF11Q9Y3C5 154 aa21.03■□□□□ 0.96
TRIM54-202ENST00000380075 QSOX1O00391 747 aa21.03■□□□□ 0.96
TRIM54-202ENST00000380075 INPP4BO15327 924 aa21.03■□□□□ 0.96
TRIM54-202ENST00000380075 AHCYL1O43865 530 aa21.03■□□□□ 0.96
TRIM54-202ENST00000380075 AP1S2P56377 157 aa21.03■□□□□ 0.96
TRIM54-202ENST00000380075 YBX1P67809 324 aaKnown RBP21.03■□□□□ 0.96
TRIM54-202ENST00000380075 IFNEQ86WN2 208 aa21.03■□□□□ 0.96
TRIM54-202ENST00000380075 ASB16Q96NS5 453 aa21.03■□□□□ 0.96
TRIM54-202ENST00000380075 SPATA16Q9BXB7 569 aa21.03■□□□□ 0.96
TRIM54-202ENST00000380075 PLXNB3Q9ULL4 1909 aa21.02■□□□□ 0.96
TRIM54-202ENST00000380075 KCNH1O95259 989 aa21.02■□□□□ 0.96
TRIM54-202ENST00000380075 IL6P05231 212 aa21.02■□□□□ 0.96
TRIM54-202ENST00000380075 CYP2A7P20853 494 aa21.02■□□□□ 0.96
TRIM54-202ENST00000380075 RPL5P46777 297 aaKnown RBP21.02■□□□□ 0.96
TRIM54-202ENST00000380075 MYBPC1Q00872 1141 aa21.02■□□□□ 0.96
TRIM54-202ENST00000380075 MAP7Q14244 749 aa21.02■□□□□ 0.96
TRIM54-202ENST00000380075 ADRM1Q16186 407 aa21.02■□□□□ 0.96
TRIM54-202ENST00000380075 CARM1Q86X55 608 aa21.02■□□□□ 0.96
TRIM54-202ENST00000380075 DNAJB8Q8NHS0 232 aa21.02■□□□□ 0.96
TRIM54-202ENST00000380075 HCAR2Q8TDS4 363 aa21.02■□□□□ 0.96
TRIM54-202ENST00000380075 SLC13A3Q8WWT9 602 aa21.02■□□□□ 0.96
TRIM54-202ENST00000380075 SLC29A1Q99808 456 aa21.02■□□□□ 0.96
TRIM54-202ENST00000380075 DPY30Q9C005 99 aa21.02■□□□□ 0.96
TRIM54-202ENST00000380075 FAM83DQ9H4H8 585 aa21.02■□□□□ 0.96
TRIM54-202ENST00000380075 ACTR8Q9H981 624 aa21.02■□□□□ 0.96
TRIM54-202ENST00000380075 C1orf109Q9NX04 203 aa21.02■□□□□ 0.96
TRIM54-202ENST00000380075 SLAMF8Q9P0V8 285 aa21.02■□□□□ 0.96
TRIM54-202ENST00000380075 DENND4AQ7Z401 1863 aa21.02■□□□□ 0.96
TRIM54-202ENST00000380075 SLC9A3R1O14745 358 aaPredicted RBP21.01■□□□□ 0.95
TRIM54-202ENST00000380075 FFAR3O14843 346 aa21.01■□□□□ 0.95
TRIM54-202ENST00000380075 GPR42O15529 346 aa21.01■□□□□ 0.95
TRIM54-202ENST00000380075 MAP3K13O43283 966 aa21.01■□□□□ 0.95
TRIM54-202ENST00000380075 CLPTM1O96005 669 aa21.01■□□□□ 0.95
TRIM54-202ENST00000380075 GRIA2P42262 883 aa21.01■□□□□ 0.95
TRIM54-202ENST00000380075 LY6G5CQ5SRR4 150 aa21.01■□□□□ 0.95
TRIM54-202ENST00000380075 RFLNAQ6ZTI6 216 aa21.01■□□□□ 0.95
TRIM54-202ENST00000380075 SMARCD2Q92925 531 aa21.01■□□□□ 0.95
TRIM54-202ENST00000380075 LRIG1Q96JA1 1093 aa21.01■□□□□ 0.95
TRIM54-202ENST00000380075 TMEM74Q96NL1 305 aa21.01■□□□□ 0.95
TRIM54-202ENST00000380075 TMPRSS11EQ9UL52 423 aa21.01■□□□□ 0.95
TRIM54-202ENST00000380075 SNX6Q9UNH7 406 aa21.01■□□□□ 0.95
TRIM54-202ENST00000380075 GFYI3L273 518 aa21.01■□□□□ 0.95
TRIM54-202ENST00000380075 VIPR2P41587 438 aa21.01■□□□□ 0.95
TRIM54-202ENST00000380075 HSPA14Q0VDF9 509 aa21.01■□□□□ 0.95
TRIM54-202ENST00000380075 TMTC4Q5T4D3 741 aa21.01■□□□□ 0.95
TRIM54-202ENST00000380075 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.01■□□□□ 0.95
TRIM54-202ENST00000380075 ADHFE1Q8IWW8 467 aa21.01■□□□□ 0.95
TRIM54-202ENST00000380075 RGL4Q8IZJ4 473 aa21.01■□□□□ 0.95
TRIM54-202ENST00000380075 TNIP2Q8NFZ5 429 aa21.01■□□□□ 0.95
TRIM54-202ENST00000380075 FRS2Q8WU20 508 aa21.01■□□□□ 0.95
TRIM54-202ENST00000380075 ANKRD60Q9BZ19 345 aa21.01■□□□□ 0.95
TRIM54-202ENST00000380075 UPK3BL1B0FP48 263 aa21■□□□□ 0.95
TRIM54-202ENST00000380075 UPK3BL2E5RIL1 263 aa21■□□□□ 0.95
TRIM54-202ENST00000380075 NPIPB8E9PQR5 432 aa21■□□□□ 0.95
TRIM54-202ENST00000380075 FTH1P02794 183 aa21■□□□□ 0.95
TRIM54-202ENST00000380075 PRPH2P23942 346 aa21■□□□□ 0.95
TRIM54-202ENST00000380075 OXTRP30559 389 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms