RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 OXR1Q8N573 874 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 ZNF671Q8TAW3 534 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 ASZ1Q8WWH4 475 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 UFD1Q92890 307 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 C1GALT1C1Q96EU7 318 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 FUBP3Q96I24 572 aaKnown RBP eCLIP8.6□□□□□ -1.03
PCDH9-202ENST00000377865 MED28Q9H204 178 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 MANBAO00462 879 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 NME4O00746 187 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 SYN3O14994 580 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 CDK14O94921 469 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 PTTG1O95997 202 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 EBLN1P0CF75 366 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 CKBP12277 381 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 CD40LGP29965 261 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 SLC5A2P31639 672 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 KCNAB2Q13303 367 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 APOFQ13790 326 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 GRB7Q14451 532 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 FBXO48Q5FWF7 155 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 C11orf88Q6PI97 169 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 C1orf74Q96LT6 269 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 KCNA7Q96RP8 456 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 GPN2Q9H9Y4 310 aaPredicted RBP8.6□□□□□ -1.03
PCDH9-202ENST00000377865 SMURF2Q9HAU4 748 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 PAK1IP1Q9NWT1 392 aaPredicted RBP8.6□□□□□ -1.03
PCDH9-202ENST00000377865 MBD2Q9UBB5 411 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 ENPP5Q9UJA9 477 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 LYVE1Q9Y5Y7 322 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 HS3ST4Q9Y661 456 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 A0A096LPI6 279 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 C1RP00736 705 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 ANXA4P09525 319 aaPredicted RBP8.59□□□□□ -1.03
PCDH9-202ENST00000377865 SMIM18P0DKX4 95 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 MAP2K5Q13163 448 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 CAPN13Q6MZZ7 669 aaPredicted RBP8.59□□□□□ -1.03
PCDH9-202ENST00000377865 OR4F6Q8NGB9 312 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 EEF1AKMT1Q8WVE0 214 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 SLC38A4Q969I6 547 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 MRGPRX2Q96LB1 330 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 CIPCQ9C0C6 399 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 LHPPQ9H008 270 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 KCNH6Q9H252 994 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 CMAHPQ9Y471 501 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 ZFP37Q9Y6Q3 630 aaPredicted RBP8.59□□□□□ -1.03
PCDH9-202ENST00000377865 NOTOA8MTQ0 251 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 SLC1A7O00341 560 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 SLC28A2O43868 658 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 PLOD3O60568 738 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 EPOP01588 193 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 FGF4P08620 206 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 ZNF157P51786 506 aaPredicted RBP8.59□□□□□ -1.03
PCDH9-202ENST00000377865 HNRNPFP52597 415 aaKnown RBP8.59□□□□□ -1.03
PCDH9-202ENST00000377865 SRP54P61011 504 aaKnown RBP8.59□□□□□ -1.03
PCDH9-202ENST00000377865 SETMARQ53H47 684 aaPredicted RBP8.59□□□□□ -1.03
PCDH9-202ENST00000377865 SDHAF4Q5VUM1 108 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 PDE12Q6L8Q7 609 aaKnown RBP8.59□□□□□ -1.03
PCDH9-202ENST00000377865 GPR153Q6NV75 609 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 GALNT7Q86SF2 657 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 TMEM102Q8N9M5 508 aaPredicted RBP8.59□□□□□ -1.03
PCDH9-202ENST00000377865 C2orf15Q8WU43 125 aaKnown RBP8.59□□□□□ -1.03
PCDH9-202ENST00000377865 NACC2Q96BF6 587 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 CCDC32Q9BV29 185 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 DUSP26Q9BV47 211 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 PRDM5Q9NQX1 630 aaPredicted RBP8.59□□□□□ -1.03
PCDH9-202ENST00000377865 TRPS1Q9UHF7 1281 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 A0A1B0GVM2 712 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 SLITRK5O94991 958 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 DGKQP52824 942 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 PTPN5P54829 565 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 TAF10Q12962 218 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 NDUFAF6Q330K2 333 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 C6orf136Q5SQH8 315 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 TMEM236Q5W0B7 351 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 PNCKQ6P2M8 343 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 CNTN4Q8IWV2 1026 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 DCBLD1Q8N8Z6 715 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 TRPM4Q8TD43 1214 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 RFKQ969G6 155 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 ISL2Q96A47 359 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 CMTM7Q96FZ5 175 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 IMP4Q96G21 291 aaKnown RBP8.59□□□□□ -1.03
PCDH9-202ENST00000377865 CDK15Q96Q40 435 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 CITED4Q96RK1 184 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 SEMA3GQ9NS98 782 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 FAM120CQ9NX05 1096 aaKnown RBP8.59□□□□□ -1.03
PCDH9-202ENST00000377865 SEC14L4Q9UDX3 406 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 CPA4Q9UI42 421 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 ZNF232Q9UNY5 417 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 GSAPA4D1B5 854 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 CDC7O00311 574 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 PPP5CP53041 499 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 SLC10A7Q0GE19 358 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 RPS27LQ71UM5 84 aaKnown RBP8.59□□□□□ -1.03
PCDH9-202ENST00000377865 ANKRD46Q86W74 232 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 GEMIN6Q8WXD5 167 aaKnown RBP8.59□□□□□ -1.03
PCDH9-202ENST00000377865 IL12RB2Q99665 862 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 KCNN2Q9H2S1 579 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 RETREG1Q9H6L5 497 aa8.59□□□□□ -1.03
PCDH9-202ENST00000377865 RAB23Q9ULC3 237 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms