RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 DIO3P55073 304 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 SRSF11Q05519 484 aaKnown RBP14.18□□□□□ -0.14
TCOF1-202ENST00000377797 NEDD8Q15843 81 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 GPAT3Q53EU6 434 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 PLEKHS1Q5SXH7 462 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 ACVR1CQ8NER5 493 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 B4GALNT2Q8NHY0 566 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 ZNF780BQ9Y6R6 833 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 E7ENX8 843 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 PEX2P28328 305 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 UFM1P61960 85 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 MRPL58Q14197 206 aaKnown RBP14.18□□□□□ -0.14
TCOF1-202ENST00000377797 PRAMEF14Q5SWL7 426 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 PRAMEF13Q5VWM6 474 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 KLHL35Q6PF15 583 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 C16orf62Q7Z3J2 963 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 C8orf59Q8N0T1 100 aaPredicted RBP14.18□□□□□ -0.14
TCOF1-202ENST00000377797 TRAM1L1Q8N609 369 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 ZNF382Q96SR6 550 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 P2RY13Q9BPV8 354 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 SLC29A3Q9BZD2 475 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 C1orf21Q9H246 121 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 KCNK6Q9Y257 313 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 NPIPB15A6NHN6 443 aaPredicted RBP14.18□□□□□ -0.14
TCOF1-202ENST00000377797 HMGA1P17096 107 aaKnown RBP14.18□□□□□ -0.14
TCOF1-202ENST00000377797 NUP107P57740 925 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 ZC3H12BQ5HYM0 836 aaKnown RBP14.18□□□□□ -0.14
TCOF1-202ENST00000377797 LRRC58Q96CX6 371 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 SLC47A1Q96FL8 570 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 PRR11Q96HE9 360 aaPredicted RBP14.18□□□□□ -0.14
TCOF1-202ENST00000377797 MUC13Q9H3R2 512 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 SAMD4AQ9UPU9 718 aaKnown RBP14.18□□□□□ -0.14
TCOF1-202ENST00000377797 AK5Q9Y6K8 562 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 MANBAO00462 879 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 OR10H2O60403 315 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 SRPRAP08240 638 aaKnown RBP14.18□□□□□ -0.14
TCOF1-202ENST00000377797 G6PDP11413 515 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 OSBPL11Q9BXB4 747 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 ZIM2Q9NZV7 527 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 RPS6KB2Q9UBS0 482 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 SCN1AP35498 2009 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 A0A087WXM4 84 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 GRID2O43424 1007 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 IFNA16P05015 189 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 ADRA1AP35348 466 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 XIAPP98170 497 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 TJAP1Q5JTD0 557 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 CCSAPQ6IQ19 270 aaPredicted RBP14.17□□□□□ -0.14
TCOF1-202ENST00000377797 PARGQ86W56 976 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 REXO5Q96IC2 774 aaKnown RBP14.17□□□□□ -0.14
TCOF1-202ENST00000377797 KRCC1Q9NPI7 259 aaPredicted RBP14.17□□□□□ -0.14
TCOF1-202ENST00000377797 PCDH7O60245 1069 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 PGM3O95394 542 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 HLA-FP30511 346 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 PGBD5Q8N414 524 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 XAGE5Q8WWM1 108 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 ZBP1Q9H171 429 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 SCHIP1Q9P0W5 487 aaPredicted RBP14.17□□□□□ -0.14
TCOF1-202ENST00000377797 ZNF232Q9UNY5 417 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 A0A1W2PP55 124 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 DNAJA2O60884 412 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 FAM20BO75063 409 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 GPIP06744 558 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 ATXN1LP0C7T5 689 aaKnown RBP14.17□□□□□ -0.14
TCOF1-202ENST00000377797 UQCRBP14927 111 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 PRPS1L1P21108 318 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 VARSP26640 1264 aaKnown RBP14.17□□□□□ -0.14
TCOF1-202ENST00000377797 KRT20P35900 424 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 ERICH5Q6P6B1 374 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 POP5Q969H6 163 aaKnown RBP14.17□□□□□ -0.14
TCOF1-202ENST00000377797 BTBD1Q9H0C5 482 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 SRMSQ9H3Y6 488 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 PAK6Q9NQU5 681 aaPredicted RBP14.17□□□□□ -0.14
TCOF1-202ENST00000377797 ENOPH1Q9UHY7 261 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 A0A0G2JN53 185 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 SNTNA6NMZ2 147 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 MAGEB17A8MXT2 336 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 HEPACAMQ14CZ8 416 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 DPY19L1Q2PZI1 675 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 OFCC1Q8IZS5 231 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 C1orf52Q8N6N3 182 aaKnown RBP14.17□□□□□ -0.14
TCOF1-202ENST00000377797 PHF10Q8WUB8 498 aaKnown RBP14.17□□□□□ -0.14
TCOF1-202ENST00000377797 BCL7CQ8WUZ0 217 aaPredicted RBP14.17□□□□□ -0.14
TCOF1-202ENST00000377797 DUSP26Q9BV47 211 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 LRRC3Q9BY71 257 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 CWH43Q9H720 699 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 IGSF5Q9NSI5 407 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 MAP4K5Q9Y4K4 846 aa14.17□□□□□ -0.14
TCOF1-202ENST00000377797 IGLV3-10A0A075B6K4 115 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 GRIA2P42262 883 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 SGSHP51688 502 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 C6orf136Q5SQH8 315 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 MBOAT1Q6ZNC8 495 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 LPCAT2Q7L5N7 544 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 SYVN1Q86TM6 617 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 KIAA2013Q8IYS2 634 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 STX19Q8N4C7 294 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 LRTOMTQ8WZ04 291 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 CLIP3Q96DZ5 547 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 DNMT3BQ9UBC3 853 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms