RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 ZNF180Q9UJW8 692 aa8.28□□□□□ -1.08
CRNKL1-202ENST00000377340 ACSL5Q9ULC5 683 aa8.28□□□□□ -1.08
CRNKL1-202ENST00000377340 SCML1Q9UN30 329 aa8.28□□□□□ -1.08
CRNKL1-202ENST00000377340 MSX2P35548 267 aaPredicted RBP8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 GUCA1AP43080 201 aaPredicted RBP8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 CLNS1AP54105 237 aaKnown RBP8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 ARHGAP8P85298 464 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 UBAP2LQ14157 1087 aaKnown RBP8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 ZNF77Q15935 545 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 LILRA6Q6PI73 481 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 SYCE2Q6PIF2 218 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 ZDHHC14Q8IZN3 488 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 NACC2Q96BF6 587 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 PPM1MQ96MI6 270 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 RAB11FIP5Q9BXF6 653 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 PCBD2Q9H0N5 130 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 PRDM8Q9NQV8 689 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 IL17CQ9P0M4 197 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 SERTAD3Q9UJW9 196 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 TRAFD1O14545 582 aaPredicted RBP8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 TPD52L2O43399 206 aaKnown RBP8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 SCN2BO60939 215 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 IFNA14P01570 189 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 AGXTP21549 392 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 DUSP3P51452 185 aaPredicted RBP8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 ARHGAP40Q5TG30 622 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 NAIF1Q69YI7 327 aaPredicted RBP8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 PIANPQ8IYJ0 282 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 ATP6V1C2Q8NEY4 427 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 TNIP2Q8NFZ5 429 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 OR9A1PQ8NGU1 263 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 CYGBQ8WWM9 190 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 SLCO2A1Q92959 643 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 C19orf60Q96EN9 201 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 ZNF232Q9UNY5 417 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 ERVK-11Q9UQG0 969 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 LOC730098B7Z3J9 87 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 MAP2K7O14733 419 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 PSMA4P25789 261 aaKnown RBP8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 RABIFP47224 123 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 AP1S2P56377 157 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 VSX2P58304 361 aaPredicted RBP8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 BTN3A2P78410 334 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 ID2Q02363 134 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 SEMA3AQ14563 771 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 DEFB110Q30KQ9 67 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 OTUD3Q5T2D3 398 aaPredicted RBP8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 PATL1Q86TB9 770 aaKnown RBP8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 THOC6Q86W42 341 aaKnown RBP8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 GPR65Q8IYL9 337 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 AGGF1Q8N302 714 aaeCLIP8.27□□□□□ -1.091e-8■□□□□ 9.4
CRNKL1-202ENST00000377340 ZNF781Q8N8C0 355 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 ADAMTS15Q8TE58 950 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 MR1Q95460 341 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 MOCOSQ96EN8 888 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 ARMC7Q9H6L4 198 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 FBRSQ9HAH7 460 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 PNO1Q9NRX1 252 aaKnown RBP8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 STX18Q9P2W9 335 aaKnown RBP8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 CNOT6Q9ULM6 557 aaKnown RBP8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 PPIEQ9UNP9 301 aaKnown RBP8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 N6AMT1Q9Y5N5 214 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 DGKBQ9Y6T7 804 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 UNC13CQ8NB66 2214 aa8.27□□□□□ -1.09
CRNKL1-202ENST00000377340 A0A1B0GVT2 93 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 TMEM150CB9EJG8 249 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 CDH1P12830 882 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 PIK3R1P27986 724 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 KIR3DL1P43629 444 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 AVPR1BP47901 424 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 TCEAL1Q15170 157 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 TGFBIQ15582 683 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 CXorf57Q6NSI4 855 aaKnown RBP8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 ZCCHC8Q6NZY4 707 aaKnown RBP8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 TMIGD1Q6UXZ0 262 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 ALYREFQ86V81 257 aaKnown RBP8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 STARD8Q92502 1023 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 KCNJ9Q92806 393 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 RNF145Q96MT1 663 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 ZNF395Q9H8N7 513 aaPredicted RBP8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 PCDHB3Q9Y5E6 796 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 MYOCOSA0A1B0GUC4 107 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 GLOD5A6NK44 160 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 FAM159BA6NKW6 160 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 PIP5K1BO14986 540 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 BIRC5O15392 142 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 PAPSS2O95340 614 aaPredicted RBP8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 SNRPB2P08579 225 aaKnown RBP8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 ACRV1P26436 265 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 AGTR2P50052 363 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 CCT8P50990 548 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 RPS7P62081 194 aaKnown RBP8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 SLC25A3Q00325 362 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 PCBP2Q15366 365 aaKnown RBP eCLIP8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 ZYG11AQ6WRX3 759 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 CHMP1BQ7LBR1 199 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 R3HCC1LQ7Z5L2 792 aaKnown RBP8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 KRT73Q86Y46 540 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 ATG16L2Q8NAA4 619 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 PROX1Q92786 737 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms