RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 ITFG1Q8TB96 612 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 ANAPC2Q9UJX6 822 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 MYOCOSA0A1B0GUC4 107 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 TSPAN11A1L157 253 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 KRT87PA6NCN2 255 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 FADS2P1A8MWK0 482 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 AP2A2O94973 939 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 CA3P07451 260 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 UMPSP11172 480 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 SLC6A12P48065 614 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 AP1S2P56377 157 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 OR4D2P58180 307 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 SELPLGQ14242 412 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 ZNF648Q5T619 568 aaPredicted RBP19.73■□□□□ 0.75
VSX1-202ENST00000376709 KRTCAP2Q8N6L1 136 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 DDHD1Q8NEL9 900 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 TIFAQ96CG3 184 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 CENPNQ96H22 339 aaPredicted RBP19.73■□□□□ 0.75
VSX1-202ENST00000376709 LRRC3BQ96PB8 259 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 RPF2Q9H7B2 306 aaKnown RBP19.73■□□□□ 0.75
VSX1-202ENST00000376709 DUS2Q9NX74 493 aaKnown RBP19.73■□□□□ 0.75
VSX1-202ENST00000376709 MAGEL2Q9UJ55 1249 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 SLC22A14Q9Y267 594 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 C16orf96A6NNT2 1141 aa19.72■□□□□ 0.75
VSX1-202ENST00000376709 IL6P05231 212 aa19.72■□□□□ 0.75
VSX1-202ENST00000376709 PGRP06401 933 aa19.72■□□□□ 0.75
VSX1-202ENST00000376709 FESP07332 822 aa19.72■□□□□ 0.75
VSX1-202ENST00000376709 ADH5P11766 374 aa19.72■□□□□ 0.75
VSX1-202ENST00000376709 ITPKAP23677 461 aa19.72■□□□□ 0.75
VSX1-202ENST00000376709 GGTA1PQ4G0N0 100 aa19.72■□□□□ 0.75
VSX1-202ENST00000376709 SLC44A4Q53GD3 710 aa19.72■□□□□ 0.75
VSX1-202ENST00000376709 SPANXN4Q5MJ08 99 aa19.72■□□□□ 0.75
VSX1-202ENST00000376709 SUSD1Q6UWL2 747 aa19.72■□□□□ 0.75
VSX1-202ENST00000376709 ADGRD2Q7Z7M1 963 aa19.72■□□□□ 0.75
VSX1-202ENST00000376709 SATL1Q86VE3 508 aa19.72■□□□□ 0.75
VSX1-202ENST00000376709 CHERPQ8IWX8 916 aaKnown RBP19.72■□□□□ 0.75
VSX1-202ENST00000376709 CBR4Q8N4T8 237 aa19.72■□□□□ 0.75
VSX1-202ENST00000376709 C12orf76Q8N812 135 aaPredicted RBP19.72■□□□□ 0.75
VSX1-202ENST00000376709 CLHC1Q8NHS4 586 aa19.72■□□□□ 0.75
VSX1-202ENST00000376709 LRIG1Q96JA1 1093 aa19.72■□□□□ 0.75
VSX1-202ENST00000376709 NSMCE2Q96MF7 247 aa19.72■□□□□ 0.75
VSX1-202ENST00000376709 MTIF3Q9H2K0 278 aaKnown RBP19.72■□□□□ 0.75
VSX1-202ENST00000376709 ASIC5Q9NY37 505 aa19.72■□□□□ 0.75
VSX1-202ENST00000376709 PCDHB3Q9Y5E6 796 aa19.72■□□□□ 0.75
VSX1-202ENST00000376709 V9GYQ6 96 aa19.72■□□□□ 0.75
VSX1-202ENST00000376709 CYP17A1P05093 508 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 ELFN1P0C7U0 828 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 TCF3P15923 654 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 HRH2P25021 359 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 NEK2P51955 445 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 POLE2P56282 527 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 ST8SIA6P61647 398 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 SYTL3Q4VX76 610 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 INTS11Q5TA45 600 aaKnown RBP19.71■□□□□ 0.75
VSX1-202ENST00000376709 GLYATQ6IB77 296 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 NEK5Q6P3R8 708 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 DPPA4Q7L190 304 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 GALNT13Q8IUC8 556 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 OR8J3Q8NGG0 315 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 SEPHS2Q99611 448 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 PRPF18Q99633 342 aaKnown RBP19.71■□□□□ 0.75
VSX1-202ENST00000376709 ATG10Q9H0Y0 220 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 DNAJC11Q9NVH1 559 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 VAPAQ9P0L0 249 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.71■□□□□ 0.75
VSX1-202ENST00000376709 CROCCQ5TZA2 2017 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 SGTAO43765 313 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 CLPTM1O96005 669 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 RB1P06400 928 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 SRPRAP08240 638 aaKnown RBP19.71■□□□□ 0.75
VSX1-202ENST00000376709 BCKDHAP12694 445 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 PLOD1Q02809 727 aaPredicted RBP19.71■□□□□ 0.75
VSX1-202ENST00000376709 ACOX1Q15067 660 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 FXNQ16595 210 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 USP39Q53GS9 565 aaKnown RBP19.71■□□□□ 0.75
VSX1-202ENST00000376709 TCEAL5Q5H9L2 206 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 ERAP2Q6P179 960 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 NEK10Q6ZWH5 1172 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 RAVER1Q8IY67 606 aaKnown RBP19.71■□□□□ 0.75
VSX1-202ENST00000376709 CELF5Q8N6W0 485 aaKnown RBP19.71■□□□□ 0.75
VSX1-202ENST00000376709 PACRGLQ8N7B6 248 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 GTF2H4Q92759 462 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 BIRC7Q96CA5 298 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 CLMPQ9H6B4 373 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 ZNF696Q9H7X3 374 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 DKK3Q9UBP4 350 aa19.71■□□□□ 0.75
VSX1-202ENST00000376709 RNF103-CHMP3A0A140T963 221 aa19.7■□□□□ 0.74
VSX1-202ENST00000376709 ARHGAP10A1A4S6 786 aa19.7■□□□□ 0.74
VSX1-202ENST00000376709 PDLIM1O00151 329 aa19.7■□□□□ 0.74
VSX1-202ENST00000376709 QSOX1O00391 747 aa19.7■□□□□ 0.74
VSX1-202ENST00000376709 AHCYL1O43865 530 aa19.7■□□□□ 0.74
VSX1-202ENST00000376709 DFNA5O60443 496 aa19.7■□□□□ 0.74
VSX1-202ENST00000376709 GMNNO75496 209 aa19.7■□□□□ 0.74
VSX1-202ENST00000376709 ASLP04424 464 aa19.7■□□□□ 0.74
VSX1-202ENST00000376709 MAP4P27816 1152 aaKnown RBP19.7■□□□□ 0.74
VSX1-202ENST00000376709 CCT8P50990 548 aa19.7■□□□□ 0.74
VSX1-202ENST00000376709 GRIN2CQ14957 1233 aa19.7■□□□□ 0.74
VSX1-202ENST00000376709 CNPY1Q3B7I2 92 aa19.7■□□□□ 0.74
VSX1-202ENST00000376709 LDLRAP1Q5SW96 308 aa19.7■□□□□ 0.74
VSX1-202ENST00000376709 THEMIS2Q5TEJ8 643 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms