RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 TRPV3Q8NET8 790 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 GTF2H4Q92759 462 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 RSPRY1Q96DX4 576 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 ZBTB18Q99592 522 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 EBPLQ9BY08 206 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 IRAK3Q9Y616 596 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 PABPN1LA6NDY0 278 aaKnown RBP15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 DLGAP1O14490 977 aa15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 EI24O14681 340 aa15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 KCNH1O95259 989 aa15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 TNFAIP8O95379 198 aa15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 C1QCP02747 245 aa15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 PGRP06401 933 aa15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 CBSLP0DN79 551 aa15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 CBSP35520 551 aa15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 PWP1Q13610 501 aa15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 DHCR24Q15392 516 aa15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 KRT80Q6KB66 452 aa15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 BRAT1Q6PJG6 821 aa15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 TRIM46Q7Z4K8 759 aa15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 PTRH1Q86Y79 214 aaKnown RBP15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 AHI1Q8N157 1196 aa15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 FAM47BQ8NA70 645 aa15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 SPDYE1Q8NFV5 336 aaPredicted RBP15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 USP7Q93009 1102 aa15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 APIPQ96GX9 242 aa15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 OR52E6Q96RD3 313 aa15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 RAD9AQ99638 391 aa15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 HPS4Q9NQG7 708 aa15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 SMOXQ9NWM0 555 aa15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 C1orf109Q9NX04 203 aa15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 SLC25A37Q9NYZ2 338 aa15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 IL36AQ9UHA7 158 aa15.58■□□□□ 0.09
CNKSR1-202ENST00000374253 CEP290O15078 2479 aa15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 CCDC160A6NGH7 325 aa15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 C16orf96A6NNT2 1141 aa15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 AP1G1O43747 822 aa15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 KIF1CO43896 1103 aaKnown RBP15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 GSTT1P30711 240 aa15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 NNMTP40261 264 aa15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 CCT8P50990 548 aa15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 PTPN5P54829 565 aa15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 PHC1P78364 1004 aa15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 ACOX1Q15067 660 aa15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 NADK2Q4G0N4 442 aa15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 NHSL2Q5HYW2 709 aa15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 NAIF1Q69YI7 327 aaPredicted RBP15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 ADNP2Q6IQ32 1131 aa15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 PPP4R4Q6NUP7 873 aa15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 MSRB3Q8IXL7 192 aa15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 C10orf111Q8N326 155 aa15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 OR10Q1Q8NGQ4 319 aa15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 CDC26Q8NHZ8 85 aa15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 NMD3Q96D46 503 aaKnown RBP15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 MED8Q96G25 268 aa15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 APOLD1Q96LR9 279 aa15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 NSMCE2Q96MF7 247 aa15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 CHID1Q9BWS9 393 aa15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 OSBPL11Q9BXB4 747 aa15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 FAM192AQ9GZU8 254 aa15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 UTS2RQ9UKP6 389 aa15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 MRPS23Q9Y3D9 190 aaKnown RBP15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 MAGED1Q9Y5V3 778 aaPredicted RBP15.58■□□□□ 0.08
CNKSR1-202ENST00000374253 CARNS1A5YM72 827 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 IFRD1O00458 451 aaPredicted RBP15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 NUAK1O60285 661 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 KRT6AP02538 564 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 KRT6BP04259 564 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 KRT6CP48668 564 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 CDH15P55291 814 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 PGS1Q32NB8 556 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 USP39Q53GS9 565 aaKnown RBP15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 PRSS36Q5K4E3 855 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 TMEM240Q5SV17 173 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 TMEM214Q6NUQ4 689 aaKnown RBP15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 TMC5Q6UXY8 1006 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 CARM1Q86X55 608 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 APLFQ8IW19 511 aaPredicted RBP15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 FBXO30Q8TB52 745 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 CYGBQ8WWM9 190 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 NXPE3Q969Y0 559 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 CENPNQ96H22 339 aaPredicted RBP15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 ZNF583Q96ND8 569 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 CARS2Q9HA77 564 aaKnown RBP15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 GRXCR1A8MXD5 290 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 CYP17A1P05093 508 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 CYP2A6P11509 494 aaPredicted RBP15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 HTR1EP28566 365 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 BDKRB1P46663 353 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 SLC6A11P48066 632 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 DGKGP49619 791 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 PPP1R8Q12972 351 aaKnown RBP15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 CHIT1Q13231 466 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 TSTA3Q13630 321 aaPredicted RBP15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 OTUD3Q5T2D3 398 aaPredicted RBP15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 TBPL2Q6SJ96 375 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 GCNT7Q6ZNI0 430 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 PARS2Q7L3T8 475 aaKnown RBP15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 OFCC1Q8IZS5 231 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms