RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 NAGSQ8N159 534 aa17.08■□□□□ 0.33
C9orf43-202ENST00000374165 GBP7Q8N8V2 638 aaPredicted RBP17.08■□□□□ 0.33
C9orf43-202ENST00000374165 TCEAL3Q969E4 200 aa17.08■□□□□ 0.33
C9orf43-202ENST00000374165 SORT1Q99523 831 aa17.08■□□□□ 0.33
C9orf43-202ENST00000374165 ELF4Q99607 663 aaPredicted RBP17.08■□□□□ 0.33
C9orf43-202ENST00000374165 GSDMCQ9BYG8 508 aa17.08■□□□□ 0.33
C9orf43-202ENST00000374165 ERVMER34-1Q9H9K5 563 aa17.08■□□□□ 0.33
C9orf43-202ENST00000374165 SLC12A4Q9UP95 1085 aa17.08■□□□□ 0.33
C9orf43-202ENST00000374165 MYO1CO00159 1063 aa17.08■□□□□ 0.32
C9orf43-202ENST00000374165 YY2O15391 372 aa17.08■□□□□ 0.32
C9orf43-202ENST00000374165 DCTN3O75935 186 aa17.08■□□□□ 0.32
C9orf43-202ENST00000374165 F3P13726 295 aa17.08■□□□□ 0.32
C9orf43-202ENST00000374165 ABCE1P61221 599 aaKnown RBP17.08■□□□□ 0.32
C9orf43-202ENST00000374165 HNRNPKP61978 463 aaKnown RBP eCLIP17.08■□□□□ 0.32
C9orf43-202ENST00000374165 GRB7Q14451 532 aa17.08■□□□□ 0.32
C9orf43-202ENST00000374165 RPE65Q16518 533 aa17.08■□□□□ 0.32
C9orf43-202ENST00000374165 FRA10AC1Q70Z53 315 aa17.08■□□□□ 0.32
C9orf43-202ENST00000374165 SLC25A45Q8N413 288 aa17.08■□□□□ 0.32
C9orf43-202ENST00000374165 FAM46DQ8NEK8 389 aa17.08■□□□□ 0.32
C9orf43-202ENST00000374165 ERP27Q96DN0 273 aa17.08■□□□□ 0.32
C9orf43-202ENST00000374165 MYLK2Q9H1R3 596 aa17.08■□□□□ 0.32
C9orf43-202ENST00000374165 ARL15Q9NXU5 204 aa17.08■□□□□ 0.32
C9orf43-202ENST00000374165 CD274Q9NZQ7 290 aa17.08■□□□□ 0.32
C9orf43-202ENST00000374165 PLAGL1Q9UM63 463 aa17.08■□□□□ 0.32
C9orf43-202ENST00000374165 ASXL3Q9C0F0 2248 aa17.07■□□□□ 0.32
C9orf43-202ENST00000374165 IFRD1O00458 451 aaPredicted RBP17.07■□□□□ 0.32
C9orf43-202ENST00000374165 TAPBPO15533 448 aa17.07■□□□□ 0.32
C9orf43-202ENST00000374165 AQP9O43315 295 aa17.07■□□□□ 0.32
C9orf43-202ENST00000374165 KLK8O60259 260 aa17.07■□□□□ 0.32
C9orf43-202ENST00000374165 PIAS2O75928 621 aa17.07■□□□□ 0.32
C9orf43-202ENST00000374165 MPLP40238 635 aa17.07■□□□□ 0.32
C9orf43-202ENST00000374165 SCTRP47872 440 aa17.07■□□□□ 0.32
C9orf43-202ENST00000374165 SETDB1Q15047 1291 aa17.07■□□□□ 0.32
C9orf43-202ENST00000374165 HLA-BQ31612 363 aa17.07■□□□□ 0.32
C9orf43-202ENST00000374165 IYDQ6PHW0 289 aa17.07■□□□□ 0.32
C9orf43-202ENST00000374165 WASH2PQ6VEQ5 465 aa17.07■□□□□ 0.32
C9orf43-202ENST00000374165 PIWIL2Q8TC59 973 aaKnown RBP17.07■□□□□ 0.32
C9orf43-202ENST00000374165 FOPNLQ96NB1 174 aa17.07■□□□□ 0.32
C9orf43-202ENST00000374165 WASH6PQ9NQA3 447 aa17.07■□□□□ 0.32
C9orf43-202ENST00000374165 IPO13O94829 963 aaKnown RBP17.06■□□□□ 0.32
C9orf43-202ENST00000374165 SLC16A8O95907 504 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 GFAPP14136 432 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 ATP5F1P24539 256 aaPredicted RBP17.06■□□□□ 0.32
C9orf43-202ENST00000374165 HOXD12P35452 270 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 SLC19A1P41440 591 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 GDF5P43026 501 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 NAGLUP54802 743 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 SP140Q13342 867 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 ELOCQ15369 112 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 DEFB133Q30KQ1 61 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 LIPMQ5VYY2 423 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 SLC23A3Q6PIS1 610 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 ZC3H14Q6PJT7 736 aaKnown RBP17.06■□□□□ 0.32
C9orf43-202ENST00000374165 PTGR2Q8N8N7 351 aaPredicted RBP17.06■□□□□ 0.32
C9orf43-202ENST00000374165 OR5K2Q8NHB8 316 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 MCOLN3Q8TDD5 553 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 SREK1Q8WXA9 508 aaKnown RBP17.06■□□□□ 0.32
C9orf43-202ENST00000374165 RHBDF1Q96CC6 855 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 TMEM237Q96Q45 408 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 PKP4Q99569 1192 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 GATA5Q9BWX5 397 aaPredicted RBP17.06■□□□□ 0.32
C9orf43-202ENST00000374165 ACTR5Q9H9F9 607 aaPredicted RBP17.06■□□□□ 0.32
C9orf43-202ENST00000374165 RDH14Q9HBH5 336 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 KCNK4Q9NYG8 393 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 NCKIPSDQ9NZQ3 722 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 SYCE1LA8MT33 242 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 SLC16A5O15375 505 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 CATP04040 527 aaKnown RBP17.06■□□□□ 0.32
C9orf43-202ENST00000374165 GIMD1P0DJR0 217 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 CCR10P46092 362 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 AQP5P55064 265 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 ACTN3Q08043 901 aaPredicted RBP17.06■□□□□ 0.32
C9orf43-202ENST00000374165 BNIP1Q12981 228 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 UNC5DQ6UXZ4 953 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 MTDHQ86UE4 582 aaKnown RBP17.06■□□□□ 0.32
C9orf43-202ENST00000374165 FBXO39Q8N4B4 442 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 PDPRQ8NCN5 879 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 PPP4R1Q8TF05 950 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 FERD3LQ96RJ6 166 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 HGH1Q9BTY7 390 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 MENTQ9BUN1 341 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 SPASTQ9UBP0 616 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 HEY2Q9UBP5 337 aa17.06■□□□□ 0.32
C9orf43-202ENST00000374165 PTBP2Q9UKA9 531 aaKnown RBP17.06■□□□□ 0.32
C9orf43-202ENST00000374165 TDRKHQ9Y2W6 561 aaKnown RBP17.06■□□□□ 0.32
C9orf43-202ENST00000374165 DMXL1Q9Y485 3027 aa17.05■□□□□ 0.32
C9orf43-202ENST00000374165 SNRNP200O75643 2136 aaKnown RBP17.05■□□□□ 0.32
C9orf43-202ENST00000374165 EPN2O95208 641 aa17.05■□□□□ 0.32
C9orf43-202ENST00000374165 HIST1H2AGP0C0S8 130 aaPredicted RBP17.05■□□□□ 0.32
C9orf43-202ENST00000374165 MTHFD1P11586 935 aaKnown RBP17.05■□□□□ 0.32
C9orf43-202ENST00000374165 HIST1H2ADP20671 130 aa17.05■□□□□ 0.32
C9orf43-202ENST00000374165 CYP2A7P20853 494 aa17.05■□□□□ 0.32
C9orf43-202ENST00000374165 MAP4P27816 1152 aaKnown RBP17.05■□□□□ 0.32
C9orf43-202ENST00000374165 PRKAA2P54646 552 aa17.05■□□□□ 0.32
C9orf43-202ENST00000374165 GATAD2AQ86YP4 633 aa17.05■□□□□ 0.32
C9orf43-202ENST00000374165 SUMF1Q8NBK3 374 aa17.05■□□□□ 0.32
C9orf43-202ENST00000374165 PPFIBP2Q8ND30 876 aa17.05■□□□□ 0.32
C9orf43-202ENST00000374165 PYCR2Q96C36 320 aa17.05■□□□□ 0.32
C9orf43-202ENST00000374165 HIST1H2AHQ96KK5 128 aa17.05■□□□□ 0.32
C9orf43-202ENST00000374165 IL17FQ96PD4 163 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms