RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 AMZ2Q86W34 360 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 NUDT13Q86X67 352 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 C15orf40Q8WUR7 153 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 NUS1Q96E22 293 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 GFM1Q96RP9 751 aaKnown RBP11.33□□□□□ -0.6
VCL-202ENST00000372755 GATA5Q9BWX5 397 aaPredicted RBP11.33□□□□□ -0.6
VCL-202ENST00000372755 FANCFQ9NPI8 374 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 STOX2Q9P2F5 926 aaPredicted RBP11.33□□□□□ -0.6
VCL-202ENST00000372755 K7EPI3 171 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 CST3P01034 146 aaPredicted RBP11.32□□□□□ -0.6
VCL-202ENST00000372755 GNSP15586 552 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 ACSL1P33121 698 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 PBX1P40424 430 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 MAZP56270 477 aaKnown RBP11.32□□□□□ -0.6
VCL-202ENST00000372755 DAOAP59103 153 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 CARD16Q5EG05 197 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 SPERTQ8NA61 448 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 PSMG2Q969U7 264 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 POLR2J3Q9H1A7 115 aaKnown RBP11.32□□□□□ -0.6
VCL-202ENST00000372755 A0A1W2PRB8 838 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 CAPN14A8MX76 684 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 PCDH7O60245 1069 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 MT-ND1P03886 318 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 FAM189A2Q15884 450 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 VARS2Q5ST30 1063 aaKnown RBP11.32□□□□□ -0.6
VCL-202ENST00000372755 ANKRD22Q5VYY1 191 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 FSTL5Q8N475 847 aaPredicted RBP11.32□□□□□ -0.6
VCL-202ENST00000372755 ING5Q8WYH8 240 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 MAFBQ9Y5Q3 323 aaPredicted RBP11.32□□□□□ -0.6
VCL-202ENST00000372755 A8MUI8 341 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 CCL22O00626 93 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 ENPP3O14638 875 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 ELNP15502 786 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 ZNF12P17014 697 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 ZNF3P17036 446 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 PIK3CBP42338 1070 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 MOB2Q70IA6 237 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 CIR1Q86X95 450 aaPredicted RBP11.32□□□□□ -0.6
VCL-202ENST00000372755 C9orf43Q8TAL5 461 aaPredicted RBP11.32□□□□□ -0.6
VCL-202ENST00000372755 SUN3Q8TAQ9 357 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 OR2AG1Q9H205 316 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 DPEP3Q9H4B8 488 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 C2CD4BA6NLJ0 364 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 TPD52L2O43399 206 aaKnown RBP11.32□□□□□ -0.6
VCL-202ENST00000372755 AKAP8O43823 692 aaKnown RBP11.32□□□□□ -0.6
VCL-202ENST00000372755 JAM2P57087 298 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 DGKZQ13574 1117 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 TOR1AIP1Q5JTV8 583 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 ZNF627Q7L945 461 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 MARCH7Q9H992 704 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 SLC31A1O15431 190 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 CPNE3O75131 537 aaKnown RBP11.32□□□□□ -0.6
VCL-202ENST00000372755 LGR5O75473 907 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 NOL4O94818 638 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 PLGP00747 810 aaPredicted RBP11.32□□□□□ -0.6
VCL-202ENST00000372755 NR2C1P13056 603 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 GSTM3P21266 225 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 TCEA1P23193 301 aaKnown RBP11.32□□□□□ -0.6
VCL-202ENST00000372755 CXCR1P25024 350 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 GPR33Q49SQ1 333 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 DNM1P34Q6PK57 102 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 PYROXD2Q8N2H3 581 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 HDDC3Q8N4P3 179 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 OR6K6Q8NGW6 343 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 SMPDL3BQ92485 455 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 SLC6A15Q9H2J7 730 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 ELAC1Q9H777 363 aaKnown RBP11.32□□□□□ -0.6
VCL-202ENST00000372755 B3GAT2Q9NPZ5 323 aa11.32□□□□□ -0.6
VCL-202ENST00000372755 C5orf51A6NDU8 294 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 TMEM88BA6NKF7 163 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 VSTM5A8MXK1 200 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 OR7A10O76100 309 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 ADGRE1Q14246 886 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 SGCBQ16585 318 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 KLHL26Q53HC5 615 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 FBXO48Q5FWF7 155 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 DRICH1Q6PGQ1 229 aaPredicted RBP11.31□□□□□ -0.6
VCL-202ENST00000372755 ZFP3Q96NJ6 502 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 GPR88Q9GZN0 384 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 SNTG1Q9NSN8 517 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 DIP2CQ9Y2E4 1556 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 MT-CYBP00156 380 aaPredicted RBP11.31□□□□□ -0.6
VCL-202ENST00000372755 RB1P06400 928 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 SLC7A1P30825 629 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 CTSOP43234 321 aaPredicted RBP11.31□□□□□ -0.6
VCL-202ENST00000372755 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.31□□□□□ -0.63e-7■■■□□ 16.9
VCL-202ENST00000372755 GXYLT1Q4G148 440 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 SWT1Q5T5J6 900 aaKnown RBP11.31□□□□□ -0.6
VCL-202ENST00000372755 ADGRD2Q7Z7M1 963 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 TBL1XR1Q9BZK7 514 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 FETUBQ9UGM5 382 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 CCDC85CA6NKD9 419 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 OR2AT4A6NND4 320 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 SEPT4O43236 478 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 CSNK2A2P19784 350 aaPredicted RBP11.31□□□□□ -0.6
VCL-202ENST00000372755 ERVK-8P63133 956 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 DGLUCYQ7Z3D6 616 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 ZNF676Q8N7Q3 588 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 C4orf32Q8N8J7 132 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 MINDY2Q8NBR6 621 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms