RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 PRMT9Q6P2P2 845 aa24.35■■□□□ 1.49
CTSA-203ENST00000372459 TDHQ8IZJ6 230 aa24.35■■□□□ 1.49
CTSA-203ENST00000372459 HIC2Q96JB3 615 aa24.35■■□□□ 1.49
CTSA-203ENST00000372459 LINC00615Q96LM1 132 aaPredicted RBP24.35■■□□□ 1.49
CTSA-203ENST00000372459 SUCOQ9UBS9 1254 aaKnown RBP24.35■■□□□ 1.49
CTSA-203ENST00000372459 ZNHIT2Q9UHR6 403 aa24.35■■□□□ 1.49
CTSA-203ENST00000372459 SNX6Q9UNH7 406 aa24.35■■□□□ 1.49
CTSA-203ENST00000372459 GPR34Q9UPC5 381 aa24.35■■□□□ 1.49
CTSA-203ENST00000372459 KRT87PA6NCN2 255 aa24.34■■□□□ 1.49
CTSA-203ENST00000372459 SLC2A4P14672 509 aa24.34■■□□□ 1.49
CTSA-203ENST00000372459 C5AR1P21730 350 aa24.34■■□□□ 1.49
CTSA-203ENST00000372459 PDHA2P29803 388 aa24.34■■□□□ 1.49
CTSA-203ENST00000372459 ZFP36L2P47974 494 aaKnown RBP24.34■■□□□ 1.49
CTSA-203ENST00000372459 PFN3P60673 137 aa24.34■■□□□ 1.49
CTSA-203ENST00000372459 SAMD4BQ5PRF9 694 aaKnown RBP24.34■■□□□ 1.49
CTSA-203ENST00000372459 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP24.34■■□□□ 1.49
CTSA-203ENST00000372459 CACUL1Q86Y37 369 aa24.34■■□□□ 1.49
CTSA-203ENST00000372459 CFAP206Q8IYR0 622 aa24.34■■□□□ 1.49
CTSA-203ENST00000372459 L3MBTL4Q8NA19 623 aa24.34■■□□□ 1.49
CTSA-203ENST00000372459 PROKR1Q8TCW9 393 aa24.34■■□□□ 1.49
CTSA-203ENST00000372459 ASB9Q96DX5 294 aa24.34■■□□□ 1.49
CTSA-203ENST00000372459 GULP1Q9UBP9 304 aa24.34■■□□□ 1.49
CTSA-203ENST00000372459 ZFC3H1O60293 1989 aaKnown RBP24.34■■□□□ 1.49
CTSA-203ENST00000372459 C17orf113A0A1B0GUU1 675 aa24.34■■□□□ 1.49
CTSA-203ENST00000372459 CCDC154A6NI56 674 aa24.34■■□□□ 1.49
CTSA-203ENST00000372459 CCDC85CA6NKD9 419 aa24.34■■□□□ 1.49
CTSA-203ENST00000372459 K7EQS6 105 aa24.34■■□□□ 1.49
CTSA-203ENST00000372459 BCAS2O75934 225 aaPredicted RBP24.34■■□□□ 1.49
CTSA-203ENST00000372459 G6PDP11413 515 aa24.34■■□□□ 1.49
CTSA-203ENST00000372459 TCN1P20061 433 aaPredicted RBP24.34■■□□□ 1.49
CTSA-203ENST00000372459 ITPKAP23677 461 aa24.34■■□□□ 1.49
CTSA-203ENST00000372459 MSX2P35548 267 aaPredicted RBP24.34■■□□□ 1.49
CTSA-203ENST00000372459 TIE1P35590 1138 aa24.34■■□□□ 1.49
CTSA-203ENST00000372459 KIR2DL1P43626 348 aaPredicted RBP24.34■■□□□ 1.49
CTSA-203ENST00000372459 SEC13P55735 322 aa24.34■■□□□ 1.49
CTSA-203ENST00000372459 MS4A2Q01362 244 aa24.34■■□□□ 1.49
CTSA-203ENST00000372459 SGO1Q5FBB7 561 aa24.34■■□□□ 1.49
CTSA-203ENST00000372459 CYP20A1Q6UW02 462 aa24.34■■□□□ 1.49
CTSA-203ENST00000372459 ADAMTSL4Q6UY14 1074 aa24.34■■□□□ 1.49
CTSA-203ENST00000372459 ABHD8Q96I13 439 aa24.34■■□□□ 1.49
CTSA-203ENST00000372459 GPATCH1Q9BRR8 931 aaKnown RBP24.34■■□□□ 1.49
CTSA-203ENST00000372459 LMCD1Q9NZU5 365 aa24.34■■□□□ 1.49
CTSA-203ENST00000372459 EIF3LQ9Y262 564 aaKnown RBP24.34■■□□□ 1.49
CTSA-203ENST00000372459 POLR3HQ9Y535 204 aaPredicted RBP24.34■■□□□ 1.49
CTSA-203ENST00000372459 DYTNA2CJ06 578 aa24.33■■□□□ 1.49
CTSA-203ENST00000372459 ZNF8P17098 575 aaPredicted RBP24.33■■□□□ 1.49
CTSA-203ENST00000372459 BDKRB1P46663 353 aa24.33■■□□□ 1.49
CTSA-203ENST00000372459 GNPDA1P46926 289 aa24.33■■□□□ 1.49
CTSA-203ENST00000372459 RPL38P63173 70 aaKnown RBP24.33■■□□□ 1.49
CTSA-203ENST00000372459 PLOD1Q02809 727 aaPredicted RBP24.33■■□□□ 1.49
CTSA-203ENST00000372459 PRKG2Q13237 762 aa24.33■■□□□ 1.49
CTSA-203ENST00000372459 RGL4Q8IZJ4 473 aa24.33■■□□□ 1.49
CTSA-203ENST00000372459 MINDY1Q8N5J2 469 aa24.33■■□□□ 1.49
CTSA-203ENST00000372459 SLC45A3Q96JT2 553 aa24.33■■□□□ 1.49
CTSA-203ENST00000372459 ELOVL6Q9H5J4 265 aa24.33■■□□□ 1.49
CTSA-203ENST00000372459 EPS15L1Q9UBC2 864 aa24.33■■□□□ 1.49
CTSA-203ENST00000372459 LEF1Q9UJU2 399 aaPredicted RBP24.33■■□□□ 1.49
CTSA-203ENST00000372459 CKAP5Q14008 2032 aa24.33■■□□□ 1.49
CTSA-203ENST00000372459 KCNE1BA0A087WTH5 132 aa24.33■■□□□ 1.48
CTSA-203ENST00000372459 IGLON5A6NGN9 336 aa24.33■■□□□ 1.48
CTSA-203ENST00000372459 ACOT8O14734 319 aa24.33■■□□□ 1.48
CTSA-203ENST00000372459 EEDO75530 441 aaKnown RBP24.33■■□□□ 1.48
CTSA-203ENST00000372459 PCDH8O95206 1070 aa24.33■■□□□ 1.48
CTSA-203ENST00000372459 LINGO3P0C6S8 592 aa24.33■■□□□ 1.48
CTSA-203ENST00000372459 SLC7A2P52569 658 aa24.33■■□□□ 1.48
CTSA-203ENST00000372459 TAS2R38P59533 333 aa24.33■■□□□ 1.48
CTSA-203ENST00000372459 HMGCS1Q01581 520 aa24.33■■□□□ 1.48
CTSA-203ENST00000372459 FOXM1Q08050 763 aa24.33■■□□□ 1.48
CTSA-203ENST00000372459 TRIM25Q14258 630 aaKnown RBP24.33■■□□□ 1.48
CTSA-203ENST00000372459 PNCKQ6P2M8 343 aa24.33■■□□□ 1.48
CTSA-203ENST00000372459 HDDC3Q8N4P3 179 aa24.33■■□□□ 1.48
CTSA-203ENST00000372459 PLA2G15Q8NCC3 412 aa24.33■■□□□ 1.48
CTSA-203ENST00000372459 SELENOMQ8WWX9 145 aa24.33■■□□□ 1.48
CTSA-203ENST00000372459 COX14Q96I36 57 aa24.33■■□□□ 1.48
CTSA-203ENST00000372459 IL1RL2Q9HB29 575 aa24.33■■□□□ 1.48
CTSA-203ENST00000372459 LRTM1Q9HBL6 345 aa24.33■■□□□ 1.48
CTSA-203ENST00000372459 STOX2Q9P2F5 926 aaPredicted RBP24.33■■□□□ 1.48
CTSA-203ENST00000372459 CD300AQ9UGN4 299 aa24.33■■□□□ 1.48
CTSA-203ENST00000372459 IL12AP29459 219 aa24.32■■□□□ 1.48
CTSA-203ENST00000372459 MAP7D1Q3KQU3 841 aa24.32■■□□□ 1.48
CTSA-203ENST00000372459 ZNF776Q68DI1 518 aaPredicted RBP24.32■■□□□ 1.48
CTSA-203ENST00000372459 AGTRAPQ6RW13 159 aa24.32■■□□□ 1.48
CTSA-203ENST00000372459 ZFAND4Q86XD8 727 aa24.32■■□□□ 1.48
CTSA-203ENST00000372459 ZNF547Q8IVP9 402 aa24.32■■□□□ 1.48
CTSA-203ENST00000372459 FBXO15Q8NCQ5 510 aaPredicted RBP24.32■■□□□ 1.48
CTSA-203ENST00000372459 FAM156AQ8NDB6 213 aa24.32■■□□□ 1.48
CTSA-203ENST00000372459 BHLHE22Q8NFJ8 381 aaPredicted RBP24.32■■□□□ 1.48
CTSA-203ENST00000372459 VPS33AQ96AX1 596 aa24.32■■□□□ 1.48
CTSA-203ENST00000372459 LRRC58Q96CX6 371 aa24.32■■□□□ 1.48
CTSA-203ENST00000372459 SLC39A3Q9BRY0 314 aa24.32■■□□□ 1.48
CTSA-203ENST00000372459 VCXQ9H320 206 aa24.32■■□□□ 1.48
CTSA-203ENST00000372459 ZNF576Q9H609 170 aa24.32■■□□□ 1.48
CTSA-203ENST00000372459 PRORSD1PA6NEY8 169 aa24.31■■□□□ 1.48
CTSA-203ENST00000372459 UGDHO60701 494 aa24.31■■□□□ 1.48
CTSA-203ENST00000372459 POP7O75817 140 aaKnown RBP24.31■■□□□ 1.48
CTSA-203ENST00000372459 PDYNP01213 254 aa24.31■■□□□ 1.48
CTSA-203ENST00000372459 PCCBP05166 539 aa24.31■■□□□ 1.48
CTSA-203ENST00000372459 HALP42357 657 aa24.31■■□□□ 1.48
CTSA-203ENST00000372459 HTR4Q13639 388 aa24.31■■□□□ 1.48
CTSA-203ENST00000372459 HABP4Q5JVS0 413 aaKnown RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms