RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 DGKGP49619 791 aa13.69□□□□□ -0.22
USF1-202ENST00000368020 SH3BGRP55822 239 aaPredicted RBP13.69□□□□□ -0.22
USF1-202ENST00000368020 HSPA14Q0VDF9 509 aa13.69□□□□□ -0.22
USF1-202ENST00000368020 BOP1Q14137 746 aaKnown RBP13.69□□□□□ -0.22
USF1-202ENST00000368020 PAGE3Q5JUK9 113 aa13.69□□□□□ -0.22
USF1-202ENST00000368020 HENMT1Q5T8I9 393 aaKnown RBP13.69□□□□□ -0.22
USF1-202ENST00000368020 NPAS3Q8IXF0 933 aa13.69□□□□□ -0.22
USF1-202ENST00000368020 SKA2Q8WVK7 121 aaPredicted RBP13.69□□□□□ -0.22
USF1-202ENST00000368020 SLC13A3Q8WWT9 602 aa13.69□□□□□ -0.22
USF1-202ENST00000368020 FGF13Q92913 245 aa13.69□□□□□ -0.22
USF1-202ENST00000368020 MRGPRX3Q96LB0 322 aa13.69□□□□□ -0.22
USF1-202ENST00000368020 C9orf16Q9BUW7 83 aa13.69□□□□□ -0.22
USF1-202ENST00000368020 DPY30Q9C005 99 aa13.69□□□□□ -0.22
USF1-202ENST00000368020 TRPV4Q9HBA0 871 aa13.69□□□□□ -0.22
USF1-202ENST00000368020 PCDH12Q9NPG4 1184 aa13.69□□□□□ -0.22
USF1-202ENST00000368020 SLC27A6Q9Y2P4 619 aa13.69□□□□□ -0.22
USF1-202ENST00000368020 LOC730098B7Z3J9 87 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 H0Y858 1186 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 TULP3O75386 442 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 SLCO2B1O94956 709 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 PRNPP04156 253 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 GSTM1P09488 218 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 FAM58BPP0C7Q3 252 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 ADH5P11766 374 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 PSMC3P17980 439 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 IL12AP29459 219 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 CASP2P42575 452 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 SLC6A12P48065 614 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 GSTM4Q03013 218 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 CBX2Q14781 532 aaPredicted RBP13.68□□□□□ -0.22
USF1-202ENST00000368020 ADRM1Q16186 407 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 RFTN2Q52LD8 501 aaPredicted RBP13.68□□□□□ -0.22
USF1-202ENST00000368020 PPP4R4Q6NUP7 873 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 FBXL19Q6PCT2 694 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 ZBTB49Q6ZSB9 765 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 FKBP9P1Q75LS8 142 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 KIAA2013Q8IYS2 634 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 L3MBTL4Q8NA19 623 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 PAPD5Q8NDF8 572 aaKnown RBP13.68□□□□□ -0.22
USF1-202ENST00000368020 TRPV3Q8NET8 790 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 FBXL8Q96CD0 374 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 CENPNQ96H22 339 aaPredicted RBP13.68□□□□□ -0.22
USF1-202ENST00000368020 ZSWIM3Q96MP5 696 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 CGREF1Q99674 301 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 ZCCHC2Q9C0B9 1178 aaKnown RBP13.68□□□□□ -0.22
USF1-202ENST00000368020 LINC00597Q9H2U6 94 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 ELOVL6Q9H5J4 265 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 ZNF696Q9H7X3 374 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 AGPAT4Q9NRZ5 378 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 DNAJC11Q9NVH1 559 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 OBP2AQ9NY56 170 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 ANAPC2Q9UJX6 822 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 CDH7Q9ULB5 785 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 PADI4Q9UM07 663 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 AURKCQ9UQB9 309 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 RNF11Q9Y3C5 154 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 WNT6Q9Y6F9 365 aa13.68□□□□□ -0.22
USF1-202ENST00000368020 C9JVG2 144 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 ATG13O75143 517 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 SEC22BO75396 215 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 TIMP2P16035 220 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 MAP4P27816 1152 aaKnown RBP13.67□□□□□ -0.22
USF1-202ENST00000368020 GDF5P43026 501 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 DHCR24Q15392 516 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 CYP51A1Q16850 503 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 ARSIQ5FYB1 569 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 TMTC4Q5T4D3 741 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 MSANTD1Q6ZTZ1 278 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 SPPL2CQ8IUH8 684 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 GALNT4Q8N4A0 578 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 DEFB123Q8N688 67 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 OSCP1Q8WVF1 389 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 MYLIPQ8WY64 445 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 ING5Q8WYH8 240 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 SUSD6Q92537 303 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 ELMO1Q92556 727 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 SMARCD2Q92925 531 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 GLMNQ92990 594 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 METTL2AQ96IZ6 378 aaKnown RBP13.67□□□□□ -0.22
USF1-202ENST00000368020 ASB16Q96NS5 453 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 CCDC115Q96NT0 180 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 ACTL8Q9H568 366 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 CLMPQ9H6B4 373 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 EPHX3Q9H6B9 360 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 DUS2Q9NX74 493 aaKnown RBP13.67□□□□□ -0.22
USF1-202ENST00000368020 CD207Q9UJ71 328 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 ZFC3H1O60293 1989 aaKnown RBP13.67□□□□□ -0.22
USF1-202ENST00000368020 REV3LO60673 3130 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 SMIM31A0A1B0GVY4 71 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 TTC34A8MYJ7 566 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 FFAR3O14843 346 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 GPR42O15529 346 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 ELFN1P0C7U0 828 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 MMP12P39900 470 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 HNRNPFP52597 415 aaKnown RBP13.67□□□□□ -0.22
USF1-202ENST00000368020 TXNL4AP83876 142 aaKnown RBP13.67□□□□□ -0.22
USF1-202ENST00000368020 CREB5Q02930 508 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 MAPKAPK3Q16644 382 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 SYTL3Q4VX76 610 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 RABL3Q5HYI8 236 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms