RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 IRF9Q00978 393 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 RTL4Q6ZR62 310 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 CMTR2Q8IYT2 770 aaKnown RBP10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 ARRDC4Q8NCT1 418 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 EBNA1BP2Q99848 306 aaKnown RBP10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 TMEM39AQ9NV64 488 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 SMOXQ9NWM0 555 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 BOLA1Q9Y3E2 137 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 KIF1AQ12756 1690 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 LSM8O95777 96 aaKnown RBP10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 PRMT2P55345 433 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 MPP1Q00013 466 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 BRMS1LQ5PSV4 323 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 ZNF611Q8N823 705 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 OR10Q1Q8NGQ4 319 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 PCDH19Q8TAB3 1148 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 TRUB1Q8WWH5 349 aaKnown RBP10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 ADAMTS10Q9H324 1103 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 ANKEF1Q9NU02 776 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 ALAS2P22557 587 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 HOXD13P35453 343 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 VLDLRP98155 873 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 NTRK3Q16288 839 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 XKR6Q5GH73 641 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 LRRC69Q6ZNQ3 347 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 NATD1Q8N6N6 113 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 ASB9Q96DX5 294 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 FBXO44Q9H4M3 255 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 DDX43Q9NXZ2 648 aaKnown RBP10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 PI4KAP42356 2102 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 TMEM221A6NGB7 291 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 TMEM233B4DJY2 109 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 SERPINB7O75635 380 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 FABP3P05413 133 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 NIPAL4Q0D2K0 466 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 MSANTD2Q6P1R3 559 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 OTOP3Q7RTS5 596 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 SSX9Q7RTT3 188 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 ACBD4Q8NC06 268 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 OR4C6Q8NH72 309 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 DDX1Q92499 740 aaKnown RBP10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 UFD1Q92890 307 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 FBRSQ9HAH7 460 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 TRAF6Q9Y4K3 522 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 C19orf81C9J6K1 198 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 MLLT6P55198 1093 aaPredicted RBP10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 LAPTM4AQ15012 233 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 ZNF720Q7Z2F6 126 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 LAPTM4BQ86VI4 370 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 C12orf57Q99622 126 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 MCMBPQ9BTE3 642 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 CISHQ9NSE2 258 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 MTMR4Q9NYA4 1195 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 DOCK8Q8NF50 2099 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 CATP04040 527 aaKnown RBP10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 LHX1P48742 406 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 BTG3Q14201 252 aaPredicted RBP10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 ERMP1Q7Z2K6 904 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 ANKRD46Q86W74 232 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 DAGLBQ8NCG7 672 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 AUTS2Q8WXX7 1259 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 KCND2Q9NZV8 630 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 KIAA1522Q9P206 1035 aaPredicted RBP10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 ANKMY1Q9P2S6 941 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 ZNF639Q9UID6 485 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 SEPT4O43236 478 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 TFEBP19484 476 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 POU4F2Q12837 409 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 GRIK4Q16099 956 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 MOCS1Q9NZB8 636 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 IL37Q9NZH6 218 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 ARHGEF28Q8N1W1 1705 aaKnown RBP10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 HNRNPH3P31942 346 aaKnown RBP10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 RHEBQ15382 184 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 ZNF574Q6ZN55 896 aaPredicted RBP10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 CEP97Q8IW35 865 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 CHERPQ8IWX8 916 aaKnown RBP10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 C11orf65Q8NCR3 313 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 SMPDL3BQ92485 455 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 HIST1H2AAQ96QV6 131 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 TCF25Q9BQ70 676 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 ZNF334Q9HCZ1 680 aaPredicted RBP10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 BPIFA1Q9NP55 256 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 NUFIP1Q9UHK0 495 aaKnown RBP10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 DHX15O43143 795 aaKnown RBP10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 EIF2DP41214 584 aaKnown RBP10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 C2orf73Q8N5S3 287 aaPredicted RBP10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 MKL1Q969V6 931 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 LURAP1Q96LR2 239 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 ZNF649Q9BS31 505 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 ENAMQ9NRM1 1142 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 ZNF226Q9NYT6 803 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 SPIN1Q9Y657 262 aaPredicted RBP10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 USP32Q8NFA0 1604 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 CACNA1EQ15878 2313 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 RACK1P63244 317 aaKnown RBP10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 HTRA4P83105 476 aaPredicted RBP10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 CHAF1BQ13112 559 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 RFPL4BQ6ZWI9 263 aa10.87□□□□□ -0.67
CDC42BPA-205ENST00000366769 Q8N402 240 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms