RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 SERPIND1P05546 499 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 PGRP06401 933 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 COX7A2P14406 83 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 CXCR2P25025 360 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 PPM1AP35813 382 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 MTHFRP42898 656 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 SP3Q02447 781 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 DAG1Q14118 895 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 AGMOQ6ZNB7 445 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 CBR4Q8N4T8 237 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 NATD1Q8N6N6 113 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 KCNS3Q9BQ31 491 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 GLYATL1P3A0A0U1RQE8 302 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 J3KR12 359 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 CA12O43570 354 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 HOXD12P35452 270 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 NSG1P42857 185 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 CAMK2GQ13555 558 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 TIGD2Q4W5G0 525 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 HSD17B12Q53GQ0 312 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 METTL2BQ6P1Q9 378 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 SPESP1Q6UW49 350 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 CYP2U1Q7Z449 544 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 DDX53Q86TM3 631 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 ASCC1Q8N9N2 400 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 KCNJ9Q92806 393 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 PSKH2Q96QS6 385 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 TUBA1CQ9BQE3 449 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 SLC22A4Q9H015 551 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 PCDHAC1Q9H158 963 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 PIDD1Q9HB75 910 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 ASB3Q9Y575 518 aa5.27□□□□□ -1.57
CDC42BPA-204ENST00000366767 GRM6O15303 877 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 STK16O75716 305 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 S1PR4O95977 384 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 C1RP00736 705 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 CD1DP15813 335 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 MSX2P35548 267 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 GPR15P49685 360 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 PEX6Q13608 980 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 LCN8Q6JVE9 175 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 USP43Q70EL4 1123 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 UBE2R2Q712K3 238 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 ZNF655Q8N720 491 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 KDM1BQ8NB78 822 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 RFT1Q96AA3 541 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 ART5Q96L15 291 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 MTIF3Q9H2K0 278 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 C1orf109Q9NX04 203 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 AKAP7Q9P0M2 348 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 UBR3Q6ZT12 1888 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 NEMP2A6NFY4 417 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 H0YAE9 185 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 PTGESO14684 152 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 PER2O15055 1255 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 OAZ2O95190 189 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 FLT3LGP49771 235 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 CD83Q01151 205 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 DDX39BQ13838 428 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 PLCL1Q15111 1095 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 HKDC1Q2TB90 917 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 FBXO42Q6P3S6 717 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 ARHGAP36Q6ZRI8 547 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 CLEC14AQ86T13 490 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 ATAD1Q8NBU5 361 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 OR8J3Q8NGG0 315 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 OR13C4Q8NGS5 318 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 CLP1Q92989 425 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 DSN1Q9H410 356 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 BPIFA1Q9NP55 256 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 ABCB9Q9NP78 766 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 MED11Q9P086 117 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 POLR3HQ9Y535 204 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 ZW10O43264 779 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 TBX1O43435 398 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 CYP7B1O75881 506 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 HPRP00739 348 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 CLTBP09497 229 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 CKBP12277 381 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 HSD17B1P14061 328 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 SMIM11AP58511 58 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 PRKCQQ04759 706 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 UNC50Q53HI1 259 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 FGD3Q5JSP0 725 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 PAQR3Q6TCH7 311 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 SLC44A2Q8IWA5 706 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 SLC13A3Q8WWT9 602 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 UPF1Q92900 1129 aaKnown RBP eCLIP5.26□□□□□ -1.572e-6■■□□□ 12.6
CDC42BPA-204ENST00000366767 NACC2Q96BF6 587 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 VMP1Q96GC9 406 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 DIRAS2Q96HU8 199 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 DRGXA6NNA5 263 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 PPM1BO75688 479 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 OR6B1O95007 311 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 APOC1P02654 83 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 IDH2P48735 452 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 SRSF11Q05519 484 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 LAPTM5Q13571 262 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 RAB6CQ53S08 254 aa5.26□□□□□ -1.57
CDC42BPA-204ENST00000366767 SNAP47Q5SQN1 464 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms