RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 GRID2O43424 1007 aa3.91□□□□□ -1.78
RNU6-560P-201ENST00000364007 PIGNO95427 931 aa3.91□□□□□ -1.78
RNU6-560P-201ENST00000364007 ACSL3O95573 720 aa3.91□□□□□ -1.78
RNU6-560P-201ENST00000364007 IGHV2-70P01814 119 aa3.91□□□□□ -1.78
RNU6-560P-201ENST00000364007 AMBPP02760 352 aa3.91□□□□□ -1.78
RNU6-560P-201ENST00000364007 FYNP06241 537 aa3.91□□□□□ -1.78
RNU6-560P-201ENST00000364007 SLC6A6P31641 620 aa3.91□□□□□ -1.78
RNU6-560P-201ENST00000364007 C9orf50Q5SZB4 431 aa3.91□□□□□ -1.78
RNU6-560P-201ENST00000364007 MFSD6Q6ZSS7 791 aa3.91□□□□□ -1.78
RNU6-560P-201ENST00000364007 NUP54Q7Z3B4 507 aa3.91□□□□□ -1.78
RNU6-560P-201ENST00000364007 ZNF329Q86UD4 541 aa3.91□□□□□ -1.78
RNU6-560P-201ENST00000364007 KLHDC8BQ8IXV7 354 aa3.91□□□□□ -1.78
RNU6-560P-201ENST00000364007 TTC30BQ8N4P2 665 aa3.91□□□□□ -1.78
RNU6-560P-201ENST00000364007 ZNF383Q8NA42 475 aa3.91□□□□□ -1.78
RNU6-560P-201ENST00000364007 KBTBD8Q8NFY9 601 aa3.91□□□□□ -1.78
RNU6-560P-201ENST00000364007 TMEM143Q96AN5 459 aa3.91□□□□□ -1.78
RNU6-560P-201ENST00000364007 HDAC11Q96DB2 347 aa3.91□□□□□ -1.78
RNU6-560P-201ENST00000364007 ZNF558Q96NG5 402 aa3.91□□□□□ -1.78
RNU6-560P-201ENST00000364007 FNBP1Q96RU3 617 aa3.91□□□□□ -1.78
RNU6-560P-201ENST00000364007 FEVQ99581 238 aa3.91□□□□□ -1.78
RNU6-560P-201ENST00000364007 NUP85Q9BW27 656 aa3.91□□□□□ -1.78
RNU6-560P-201ENST00000364007 LAT2Q9GZY6 243 aa3.91□□□□□ -1.78
RNU6-560P-201ENST00000364007 SIX2Q9NPC8 291 aa3.91□□□□□ -1.78
RNU6-560P-201ENST00000364007 SDR39U1Q9NRG7 319 aaPredicted RBP3.91□□□□□ -1.78
RNU6-560P-201ENST00000364007 ADPRHL2Q9NX46 363 aa3.91□□□□□ -1.78
RNU6-560P-201ENST00000364007 TSPY2A6NKD2 308 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 TCERG1O14776 1098 aaKnown RBP3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 ATP5BP06576 529 aaKnown RBP3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 TSPY3P0CV98 308 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 TSPY8P0CW00 308 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 ERVK-10P10266 1014 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 CD22P20273 847 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 CA4P22748 312 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 CCR10P46092 362 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 PDX1P52945 283 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 TSPY1Q01534 308 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 COG2Q14746 738 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 TNIP1Q15025 636 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 CA9Q16790 459 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 UGP2Q16851 508 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 XKR3Q5GH77 459 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 ELFN2Q5R3F8 820 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 KRT39Q6A163 491 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 PRR27Q6MZM9 219 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 CHST3Q7LGC8 479 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 RTN4RL2Q86UN3 420 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 ANKRD13CQ8N6S4 541 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 THAP8Q8NA92 274 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 TRIM58Q8NG06 486 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 ATL1Q8WXF7 558 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 ZNF501Q96CX3 271 aaPredicted RBP3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 THOC1Q96FV9 657 aaKnown RBP3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 FER1L6-AS2Q96M78 137 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 CPNE1Q99829 537 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 SLC52A3Q9NQ40 469 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 STK26Q9P289 416 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 ZNF624Q9P2J8 865 aaPredicted RBP3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 CACNG4Q9UBN1 327 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 ZDHHC2Q9UIJ5 367 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 TMED3Q9Y3Q3 217 aa3.9□□□□□ -1.79
RNU6-560P-201ENST00000364007 LOC101059948A0A1B0GTJ6 334 aa3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 PRR23AA6NEV1 266 aa3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 RNASEH1O60930 286 aaKnown RBP3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 PRKRAO75569 313 aaKnown RBP3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 IGKV3-20P01619 116 aa3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 HAPLN1P10915 354 aaPredicted RBP3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 ERCC2P18074 760 aa3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 CEACAM8P31997 349 aaPredicted RBP3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 MNDAP41218 407 aa3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 NKX2-1P43699 371 aaPredicted RBP3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 LIMK1P53667 647 aa3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 PRKCZQ05513 592 aa3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 VEZF1Q14119 521 aa3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 KIAA1644Q3SXP7 199 aa3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 UGT3A2Q3SY77 523 aa3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 CYP4A22Q5TCH4 519 aa3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 Q6ZTC4 211 aa3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 DET1Q7L5Y6 550 aa3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 EID3Q8N140 333 aa3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 CAMKVQ8NCB2 501 aa3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 CCDC107Q8WV48 283 aa3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 ZNF653Q96CK0 615 aa3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 OTUB1Q96FW1 271 aaPredicted RBP3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 NSL1Q96IY1 281 aa3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 MUS81Q96NY9 551 aa3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 RAD9AQ99638 391 aa3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 AP1M1Q9BXS5 423 aa3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 ZCCHC17Q9NP64 241 aaKnown RBP3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 CPSF3Q9UKF6 684 aaKnown RBP3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 KCNJ14Q9UNX9 436 aa3.89□□□□□ -1.79
RNU6-560P-201ENST00000364007 A0A1W2PN81 502 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 A0A1W2PPK0 400 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 ANKRD61A6NGH8 418 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 FAM72CH0Y354 149 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 CLIC2O15247 247 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 PENKP01210 267 aaPredicted RBP3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 INHBAP08476 426 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 CCDC175P0C221 793 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 PATE4P0C8F1 98 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 CFC1BP0CG36 223 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms