RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 ATG16L1Q676U5 607 aa20.09■□□□□ 0.81
SHISA4-201ENST00000362011 TTC23LQ6PF05 361 aa20.09■□□□□ 0.81
SHISA4-201ENST00000362011 TAF8Q7Z7C8 310 aa20.09■□□□□ 0.81
SHISA4-201ENST00000362011 CEP76Q8TAP6 659 aa20.09■□□□□ 0.81
SHISA4-201ENST00000362011 ZNF75CPQ92670 426 aaPredicted RBP20.09■□□□□ 0.81
SHISA4-201ENST00000362011 INSM2Q96T92 566 aaPredicted RBP20.09■□□□□ 0.81
SHISA4-201ENST00000362011 CAAP1Q9H8G2 361 aa20.09■□□□□ 0.81
SHISA4-201ENST00000362011 MANSC1Q9H8J5 431 aa20.09■□□□□ 0.81
SHISA4-201ENST00000362011 HEBP2Q9Y5Z4 205 aa20.09■□□□□ 0.81
SHISA4-201ENST00000362011 GIPC1O14908 333 aa20.08■□□□□ 0.81
SHISA4-201ENST00000362011 CSRP1P21291 193 aaKnown RBP20.08■□□□□ 0.81
SHISA4-201ENST00000362011 NOVA1P51513 510 aaKnown RBP20.08■□□□□ 0.81
SHISA4-201ENST00000362011 CLCA4Q14CN2 919 aa20.08■□□□□ 0.81
SHISA4-201ENST00000362011 SETDB1Q15047 1291 aa20.08■□□□□ 0.81
SHISA4-201ENST00000362011 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.08■□□□□ 0.81
SHISA4-201ENST00000362011 SULT1C3Q6IMI6 304 aa20.08■□□□□ 0.81
SHISA4-201ENST00000362011 ZCCHC23Q6ZST2 131 aa20.08■□□□□ 0.81
SHISA4-201ENST00000362011 DCUN1D3Q8IWE4 304 aa20.08■□□□□ 0.81
SHISA4-201ENST00000362011 TCAIMQ8N3R3 496 aa20.08■□□□□ 0.81
SHISA4-201ENST00000362011 KDF1Q8NAX2 398 aaPredicted RBP20.08■□□□□ 0.81
SHISA4-201ENST00000362011 FERD3LQ96RJ6 166 aa20.08■□□□□ 0.81
SHISA4-201ENST00000362011 TRIT1Q9H3H1 467 aaKnown RBP20.08■□□□□ 0.81
SHISA4-201ENST00000362011 WWOXQ9NZC7 414 aa20.08■□□□□ 0.81
SHISA4-201ENST00000362011 TAAR2Q9P1P5 351 aa20.08■□□□□ 0.81
SHISA4-201ENST00000362011 SNX11Q9Y5W9 270 aa20.08■□□□□ 0.81
SHISA4-201ENST00000362011 CFAP20Q9Y6A4 193 aaKnown RBP20.08■□□□□ 0.81
SHISA4-201ENST00000362011 KNL1Q8NG31 2342 aa20.08■□□□□ 0.8
SHISA4-201ENST00000362011 SERPINE1P05121 402 aa20.07■□□□□ 0.8
SHISA4-201ENST00000362011 CELA2BP08218 269 aaPredicted RBP20.07■□□□□ 0.8
SHISA4-201ENST00000362011 F3P13726 295 aa20.07■□□□□ 0.8
SHISA4-201ENST00000362011 SLC2A4P14672 509 aa20.07■□□□□ 0.8
SHISA4-201ENST00000362011 IMPDH1P20839 514 aa20.07■□□□□ 0.8
SHISA4-201ENST00000362011 RPE65Q16518 533 aa20.07■□□□□ 0.8
SHISA4-201ENST00000362011 KIF19Q2TAC6 998 aa20.07■□□□□ 0.8
SHISA4-201ENST00000362011 MBOAT1Q6ZNC8 495 aa20.07■□□□□ 0.8
SHISA4-201ENST00000362011 RGS9BPQ6ZS82 235 aa20.07■□□□□ 0.8
SHISA4-201ENST00000362011 GKN2Q86XP6 184 aa20.07■□□□□ 0.8
SHISA4-201ENST00000362011 TBC1D21Q8IYX1 336 aa20.07■□□□□ 0.8
SHISA4-201ENST00000362011 PHC3Q8NDX5 983 aa20.07■□□□□ 0.8
SHISA4-201ENST00000362011 OR5AR1Q8NGP9 310 aa20.07■□□□□ 0.8
SHISA4-201ENST00000362011 OR5K2Q8NHB8 316 aa20.07■□□□□ 0.8
SHISA4-201ENST00000362011 LMX1AQ8TE12 382 aa20.07■□□□□ 0.8
SHISA4-201ENST00000362011 RAD51AP1Q96B01 352 aa20.07■□□□□ 0.8
SHISA4-201ENST00000362011 RHBDF1Q96CC6 855 aa20.07■□□□□ 0.8
SHISA4-201ENST00000362011 L3HYPDHQ96EM0 354 aa20.07■□□□□ 0.8
SHISA4-201ENST00000362011 CCDC138Q96M89 665 aa20.07■□□□□ 0.8
SHISA4-201ENST00000362011 TMEM237Q96Q45 408 aa20.07■□□□□ 0.8
SHISA4-201ENST00000362011 GATA5Q9BWX5 397 aaPredicted RBP20.07■□□□□ 0.8
SHISA4-201ENST00000362011 IMP3Q9NV31 184 aaKnown RBP20.07■□□□□ 0.8
SHISA4-201ENST00000362011 A6NCN8 305 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 C1QTNF9BB2RNN3 333 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 KLF11O14901 512 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 KHNYNO15037 678 aaKnown RBP20.06■□□□□ 0.8
SHISA4-201ENST00000362011 EML2O95834 649 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 CFIP05156 583 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 C1QTNF9P0C862 333 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 MTHFD1P11586 935 aaKnown RBP20.06■□□□□ 0.8
SHISA4-201ENST00000362011 CEACAM1P13688 526 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 GRK2P25098 689 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 EEF1DP29692 281 aaKnown RBP20.06■□□□□ 0.8
SHISA4-201ENST00000362011 HNMTP50135 292 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 NAGLUP54802 743 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 HERVK_113P63132 956 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 BNC1Q01954 994 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 STX3Q13277 289 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 KRT33BQ14525 404 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 CCSMST1Q4G0I0 132 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 ZNF678Q5SXM1 525 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 DUS1LQ6P1R4 473 aaKnown RBP20.06■□□□□ 0.8
SHISA4-201ENST00000362011 UNQ6494/PRO21346Q6UXR6 183 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 SDR16C5Q8N3Y7 309 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 CCNYL1Q8N7R7 359 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 OR9A1PQ8NGU1 263 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 ATL1Q8WXF7 558 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 FBXL8Q96CD0 374 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 PKP4Q99569 1192 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 ERVK-6Q9BXR3 956 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 MVB12BQ9H7P6 319 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 SCHIP1Q9P0W5 487 aaPredicted RBP20.06■□□□□ 0.8
SHISA4-201ENST00000362011 PTBP2Q9UKA9 531 aaKnown RBP20.06■□□□□ 0.8
SHISA4-201ENST00000362011 DOLKQ9UPQ8 538 aa20.06■□□□□ 0.8
SHISA4-201ENST00000362011 TNPO3Q9Y5L0 923 aaKnown RBP20.06■□□□□ 0.8
SHISA4-201ENST00000362011 ASPMQ8IZT6 3477 aa20.05■□□□□ 0.8
SHISA4-201ENST00000362011 OR52A4PA6NMU1 304 aa20.05■□□□□ 0.8
SHISA4-201ENST00000362011 MYO1CO00159 1063 aa20.05■□□□□ 0.8
SHISA4-201ENST00000362011 AQP9O43315 295 aa20.05■□□□□ 0.8
SHISA4-201ENST00000362011 PIAS2O75928 621 aa20.05■□□□□ 0.8
SHISA4-201ENST00000362011 LSP1P33241 339 aa20.05■□□□□ 0.8
SHISA4-201ENST00000362011 NAA20P61599 178 aa20.05■□□□□ 0.8
SHISA4-201ENST00000362011 BST1Q10588 318 aa20.05■□□□□ 0.8
SHISA4-201ENST00000362011 CFAP157Q5JU67 520 aa20.05■□□□□ 0.8
SHISA4-201ENST00000362011 PRAMEF14Q5SWL7 426 aa20.05■□□□□ 0.8
SHISA4-201ENST00000362011 ZNF548Q8NEK5 533 aaPredicted RBP20.05■□□□□ 0.8
SHISA4-201ENST00000362011 OR6Y1Q8NGX8 325 aa20.05■□□□□ 0.8
SHISA4-201ENST00000362011 UBTD2Q8WUN7 234 aa20.05■□□□□ 0.8
SHISA4-201ENST00000362011 CXorf40BQ96DE9 158 aa20.05■□□□□ 0.8
SHISA4-201ENST00000362011 ELF4Q99607 663 aaPredicted RBP20.05■□□□□ 0.8
SHISA4-201ENST00000362011 HGH1Q9BTY7 390 aa20.05■□□□□ 0.8
SHISA4-201ENST00000362011 TMEM9BQ9NQ34 198 aa20.05■□□□□ 0.8
SHISA4-201ENST00000362011 POLG2Q9UHN1 485 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms