RNA–Protein interactions for RNA: ENST00000362003.9

PCGF3-201, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCGF3, Length 5,685 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-201ENST00000362003 SCARB2Q14108 478 aa16.88■□□□□ 0.29
PCGF3-201ENST00000362003 DGCR14Q96DF8 476 aaKnown RBP16.88■□□□□ 0.29
PCGF3-201ENST00000362003 COL2A1P02458 1487 aaPredicted RBP16.88■□□□□ 0.29
PCGF3-201ENST00000362003 HCRTO43612 131 aa16.88■□□□□ 0.29
PCGF3-201ENST00000362003 GRIA1P42261 906 aa16.88■□□□□ 0.29
PCGF3-201ENST00000362003 MLLT6P55198 1093 aaPredicted RBP16.88■□□□□ 0.29
PCGF3-201ENST00000362003 AP1S2P56377 157 aa16.88■□□□□ 0.29
PCGF3-201ENST00000362003 ZZZ3Q8IYH5 903 aa16.88■□□□□ 0.29
PCGF3-201ENST00000362003 MTERF1Q99551 399 aaKnown RBP16.88■□□□□ 0.29
PCGF3-201ENST00000362003 C11orf16Q9NQ32 467 aa16.88■□□□□ 0.29
PCGF3-201ENST00000362003 MCM8Q9UJA3 840 aa16.88■□□□□ 0.29
PCGF3-201ENST00000362003 PRPS1L1P21108 318 aa16.88■□□□□ 0.29
PCGF3-201ENST00000362003 MPIP34949 423 aa16.88■□□□□ 0.29
PCGF3-201ENST00000362003 C22orf39Q6P5X5 142 aa16.88■□□□□ 0.29
PCGF3-201ENST00000362003 OR5K1Q8NHB7 308 aa16.88■□□□□ 0.29
PCGF3-201ENST00000362003 CDK15Q96Q40 435 aa16.88■□□□□ 0.29
PCGF3-201ENST00000362003 SIRPGQ9P1W8 387 aa16.88■□□□□ 0.29
PCGF3-201ENST00000362003 A0A1W2PRB8 838 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 LEFTY2O00292 366 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 PRAMEF11O60813 436 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 Q6ZVU0 165 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 ATP6V1C2Q8NEY4 427 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 MCFD2Q8NI22 146 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 BPIFB1Q8TDL5 484 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 SNX33Q8WV41 574 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 GMLQ99445 158 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 NPY6RQ99463 290 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 SIX4Q9UIU6 781 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 SAP18O00422 153 aaKnown RBP16.87■□□□□ 0.29
PCGF3-201ENST00000362003 ATP5A1P25705 553 aaKnown RBP16.87■□□□□ 0.29
PCGF3-201ENST00000362003 ACTR1BP42025 376 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 MTPNP58546 118 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 ACTR1AP61163 376 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 FOXM1Q08050 763 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 SP140Q13342 867 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 C2orf27AQ580R0 203 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 SLC30A6Q6NXT4 461 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 VPS29Q9UBQ0 182 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 LAMB4A4D0S4 1761 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 C10orf71Q711Q0 1435 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 CXorf49A8MYA2 514 aaPredicted RBP16.87■□□□□ 0.29
PCGF3-201ENST00000362003 H3BNX3 289 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 PAPSS2O95340 614 aaPredicted RBP16.87■□□□□ 0.29
PCGF3-201ENST00000362003 GJA1P17302 382 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 HOXD13P35453 343 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 CXorf57Q6NSI4 855 aaKnown RBP16.87■□□□□ 0.29
PCGF3-201ENST00000362003 PDPRQ8NCN5 879 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 NEK7Q8TDX7 302 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 GTPBP3Q969Y2 492 aaKnown RBP16.87■□□□□ 0.29
PCGF3-201ENST00000362003 CMTM7Q96FZ5 175 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 PIGUQ9H490 435 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 DENND2DQ9H6A0 471 aaPredicted RBP16.87■□□□□ 0.29
PCGF3-201ENST00000362003 DNAJB9Q9UBS3 223 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 SQORQ9Y6N5 450 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 STX16-NPEPL1H3BU86 382 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 STX16O14662 325 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 LRRC17Q8N6Y2 441 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 DCAF4L2Q8NA75 395 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 AVL9Q8NBF6 648 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 SMURF2Q9HAU4 748 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 MCUBQ9NWR8 336 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 HCN3Q9P1Z3 774 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 TMEM150CB9EJG8 249 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 MYCLP1P12525 358 aaPredicted RBP16.87■□□□□ 0.29
PCGF3-201ENST00000362003 BDKRB1P46663 353 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 PGDP52209 483 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 RPL26P61254 145 aaKnown RBP16.87■□□□□ 0.29
PCGF3-201ENST00000362003 ADGRE1Q14246 886 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 SUZ12Q15022 739 aaKnown RBP16.87■□□□□ 0.29
PCGF3-201ENST00000362003 UPP1Q16831 310 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 ZNF570Q96NI8 536 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 TUBGCP5Q96RT8 1024 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 SLC2A6Q9UGQ3 507 aa16.87■□□□□ 0.29
PCGF3-201ENST00000362003 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.86■□□□□ 0.29
PCGF3-201ENST00000362003 LOC110117498-PIK3R3F6TDL0 507 aa16.86■□□□□ 0.29
PCGF3-201ENST00000362003 EEFSECP57772 596 aaKnown RBP16.86■□□□□ 0.29
PCGF3-201ENST00000362003 GPR65Q8IYL9 337 aa16.86■□□□□ 0.29
PCGF3-201ENST00000362003 RNF31Q96EP0 1072 aa16.86■□□□□ 0.29
PCGF3-201ENST00000362003 PCYT2Q99447 389 aa16.86■□□□□ 0.29
PCGF3-201ENST00000362003 LRRC3Q9BY71 257 aa16.86■□□□□ 0.29
PCGF3-201ENST00000362003 CRTAC1Q9NQ79 661 aa16.86■□□□□ 0.29
PCGF3-201ENST00000362003 DNAAF2Q9NVR5 837 aaKnown RBP16.86■□□□□ 0.29
PCGF3-201ENST00000362003 NLE1Q9NVX2 485 aaPredicted RBP16.86■□□□□ 0.29
PCGF3-201ENST00000362003 ANKRD66B4E2M5 251 aa16.86■□□□□ 0.29
PCGF3-201ENST00000362003 CLDN7O95471 211 aa16.86■□□□□ 0.29
PCGF3-201ENST00000362003 ADH1BP00325 375 aa16.86■□□□□ 0.29
PCGF3-201ENST00000362003 ALOX5P09917 674 aa16.86■□□□□ 0.29
PCGF3-201ENST00000362003 TYRP14679 529 aa16.86■□□□□ 0.29
PCGF3-201ENST00000362003 YAP1P46937 504 aaKnown RBP16.86■□□□□ 0.29
PCGF3-201ENST00000362003 IFNLR1Q8IU57 520 aaPredicted RBP16.86■□□□□ 0.29
PCGF3-201ENST00000362003 ZNF461Q8TAF7 563 aa16.86■□□□□ 0.29
PCGF3-201ENST00000362003 DERL2Q9GZP9 239 aa16.86■□□□□ 0.29
PCGF3-201ENST00000362003 ATXN10Q9UBB4 475 aa16.86■□□□□ 0.29
PCGF3-201ENST00000362003 PRKAB1Q9Y478 270 aa16.86■□□□□ 0.29
PCGF3-201ENST00000362003 FOXN2P32314 431 aa16.86■□□□□ 0.29
PCGF3-201ENST00000362003 GRK6P43250 576 aa16.86■□□□□ 0.29
PCGF3-201ENST00000362003 DNASE1L1P49184 302 aa16.86■□□□□ 0.29
PCGF3-201ENST00000362003 SLC18A1P54219 525 aa16.86■□□□□ 0.29
PCGF3-201ENST00000362003 TPRG1Q6ZUI0 275 aa16.86■□□□□ 0.29
PCGF3-201ENST00000362003 THOC6Q86W42 341 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms