RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 RPIAP49247 311 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 BLKP51451 505 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 GFERP55789 205 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 HHEXQ03014 270 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 TAP2Q03519 686 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 NAB1Q13506 487 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 TSTA3Q13630 321 aaPredicted RBP3.91□□□□□ -1.78
LIG4-201ENST00000356922 TECRLQ5HYJ1 363 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 ADNP2Q6IQ32 1131 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 LRIG3Q6UXM1 1119 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 WASH2PQ6VEQ5 465 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 UBE2R2Q712K3 238 aaPredicted RBP3.91□□□□□ -1.78
LIG4-201ENST00000356922 ADGRF3Q8IZF5 1079 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 BAHD1Q8TBE0 780 aaPredicted RBP3.91□□□□□ -1.78
LIG4-201ENST00000356922 FAM174AQ8TBP5 190 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 SCG3Q8WXD2 468 aaKnown RBP3.91□□□□□ -1.78
LIG4-201ENST00000356922 GLMNQ92990 594 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 EXT2Q93063 718 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 PHF21BQ96EK2 531 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 TSNARE1Q96NA8 513 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 FCRL4Q96PJ5 515 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 FAM111AQ96PZ2 611 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 ACAT2Q9BWD1 397 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 SLC12A9Q9BXP2 914 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 GSDMCQ9BYG8 508 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 DERL2Q9GZP9 239 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 ZBTB26Q9HCK0 441 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 WASH6PQ9NQA3 447 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 NSMCE4AQ9NXX6 385 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 ZNF225Q9UK10 706 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 ACSL5Q9ULC5 683 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 VPS9D1Q9Y2B5 631 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 PLLPQ9Y342 182 aa3.91□□□□□ -1.78
LIG4-201ENST00000356922 COL12A1Q99715 3063 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 IQANK1A0A1B0GTG1 560 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 SPAARA0A1B0GVQ0 90 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 A0A1W2PNU3 283 aaPredicted RBP3.9□□□□□ -1.78
LIG4-201ENST00000356922 EME2A4GXA9 379 aaPredicted RBP3.9□□□□□ -1.78
LIG4-201ENST00000356922 GOLGA6L10A6NI86 522 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 F8W8V4 182 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 PRICKLE3O43900 615 aaPredicted RBP3.9□□□□□ -1.78
LIG4-201ENST00000356922 MAGEC1O60732 1142 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 PROCP04070 461 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 ANXA6P08133 673 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 SYPP08247 313 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 SLC35G4P0C7Q5 338 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 CD1CP29017 333 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 CRABP2P29373 138 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 CSF2RBP32927 897 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 SERPINB8P50452 374 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 SERPINB9P50453 376 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 CCT8P50990 548 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 PDX1P52945 283 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 AASDHQ4L235 1098 aaPredicted RBP3.9□□□□□ -1.78
LIG4-201ENST00000356922 SYTL3Q4VX76 610 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 AGAP9Q5VTM2 703 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 LVRNQ6Q4G3 990 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 ZCCHC23Q6ZST2 131 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 DGLUCYQ7Z3D6 616 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 B3GNT8Q7Z7M8 397 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 PIP4P1Q86T03 277 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 ARMC2Q8NEN0 867 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 KIAA1191Q96A73 305 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 NUDT22Q9BRQ3 303 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 TMEM79Q9BSE2 394 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 PITPNM3Q9BZ71 974 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 TWSG1Q9GZX9 223 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 SPNS1Q9H2V7 528 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 VIPAS39Q9H9C1 493 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 TMEM9BQ9NQ34 198 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 PADI4Q9UM07 663 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 PIEZO2Q9H5I5 2752 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 COL27A1Q8IZC6 1860 aaPredicted RBP3.9□□□□□ -1.78
LIG4-201ENST00000356922 WDR91A4D1P6 747 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 UBFD1O14562 309 aaKnown RBP3.9□□□□□ -1.78
LIG4-201ENST00000356922 DYNC1I1O14576 645 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 PLIN3O60664 434 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 LTA4HP09960 611 aaKnown RBP3.9□□□□□ -1.78
LIG4-201ENST00000356922 MYZAPP0CAP1 466 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 PVRP15151 417 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 NPPBP16860 134 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 HPDP32754 393 aaPredicted RBP3.9□□□□□ -1.78
LIG4-201ENST00000356922 CRHR1P34998 444 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 GRIA3P42263 894 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 FASLGP48023 281 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 CDH13P55290 713 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 RPA4Q13156 261 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 ZIC1Q15915 447 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 PFKFB4Q16877 469 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 AMZ1Q400G9 498 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 C14orf28Q4W4Y0 310 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 TRIM73Q86UV7 250 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 ALYREFQ86V81 257 aaKnown RBP3.9□□□□□ -1.78
LIG4-201ENST00000356922 C10orf107Q8IVU9 208 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 RNF175Q8N4F7 328 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 DTWD1Q8N5C7 304 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 RCBTB1Q8NDN9 531 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 ZNF740Q8NDX6 193 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 DEFB124Q8NES8 71 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 RHBDF1Q96CC6 855 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms