RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 OR6M1Q8NGM8 313 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 HTR3CQ8WXA8 447 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 ZNF670Q9BS34 389 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 LRRC3Q9BY71 257 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 RHOJQ9H4E5 214 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 PIF1Q9H611 641 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 RC3H2Q9HBD1 1191 aaKnown RBP15.41■□□□□ 0.06
RTN3-205ENST00000356000 HPF1Q9NWY4 346 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 VPS9D1Q9Y2B5 631 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 SLC35F4A4IF30 521 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 ASPDHA6ND91 283 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 PPP6CO00743 305 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 PGK1P00558 417 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 TNNC2P02585 160 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 AZGP1P25311 298 aaKnown RBP15.41■□□□□ 0.06
RTN3-205ENST00000356000 RRAS2P62070 204 aaPredicted RBP15.41■□□□□ 0.06
RTN3-205ENST00000356000 CDH17Q12864 832 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 ORC1Q13415 861 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 ZNF169Q14929 603 aaPredicted RBP15.41■□□□□ 0.06
RTN3-205ENST00000356000 MAD2L1BPQ15013 274 aaPredicted RBP15.41■□□□□ 0.06
RTN3-205ENST00000356000 PAGE3Q5JUK9 113 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 FAM219BQ5XKK7 198 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 RPS27LQ71UM5 84 aaKnown RBP15.41■□□□□ 0.06
RTN3-205ENST00000356000 TMPRSS9Q7Z410 1059 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 LINC00052Q96N35 136 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 RIT2Q99578 217 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 PELOQ9BRX2 385 aaKnown RBP15.41■□□□□ 0.06
RTN3-205ENST00000356000 NTPCRQ9BSD7 190 aaKnown RBP15.41■□□□□ 0.06
RTN3-205ENST00000356000 TRIM45Q9H8W5 580 aaPredicted RBP15.41■□□□□ 0.06
RTN3-205ENST00000356000 IL1RAPQ9NPH3 570 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 CISHQ9NSE2 258 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 ABCB8Q9NUT2 735 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 MYL12BO14950 172 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 LYPLA2O95372 231 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 LDOC1O95751 146 aaPredicted RBP15.4■□□□□ 0.06
RTN3-205ENST00000356000 MYL12AP19105 171 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 GPD1P21695 349 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 HNF1BP35680 557 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 NRIP1P48552 1158 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 MLLT1Q03111 559 aaPredicted RBP15.4■□□□□ 0.06
RTN3-205ENST00000356000 MRPL28Q13084 256 aaKnown RBP15.4■□□□□ 0.06
RTN3-205ENST00000356000 FSCN1Q16658 493 aaKnown RBP15.4■□□□□ 0.06
RTN3-205ENST00000356000 TUSC1Q2TAM9 212 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 COL28A1Q2UY09 1125 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 TMPRSS11AQ6ZMR5 421 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 RBFAQ8N0V3 343 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 FAM86B1Q8N7N1 296 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 FAM181AQ8N9Y4 354 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 SORCS2Q96PQ0 1159 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 PPP1R2P1Q96PQ5 205 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 RACGAP1Q9H0H5 632 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 ELOVL6Q9H5J4 265 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 CUEDC1Q9NWM3 386 aaPredicted RBP15.4■□□□□ 0.06
RTN3-205ENST00000356000 COA4Q9NYJ1 87 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 GPRC5BQ9NZH0 403 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 TMEM5Q9Y2B1 443 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 TMEM150BA6NC51 233 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 LINC00587B1AMM8 73 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 DDX39AO00148 427 aaKnown RBP15.4■□□□□ 0.06
RTN3-205ENST00000356000 HRO43593 1189 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 MITFO75030 526 aaPredicted RBP15.4■□□□□ 0.06
RTN3-205ENST00000356000 SLC34A2O95436 690 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 CYP2F1P24903 491 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 KCNK10P57789 538 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 GRIK2Q13002 908 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 NKG7Q16617 165 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 FLYWCH1Q4VC44 716 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 TRNP1Q6NT89 227 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 PLET1Q6UQ28 207 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 TRILQ7L0X0 811 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 FAM124AQ86V42 546 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 SLC41A1Q8IVJ1 513 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 SPATA6LQ8N4H0 392 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 GPR151Q8TDV0 419 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 COPS5Q92905 334 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 WBP1Q96G27 269 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 SERPINB11Q96P15 392 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 WDFY2Q96P53 400 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 CHCHD6Q9BRQ6 235 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 CD93Q9NPY3 652 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 MCUBQ9NWR8 336 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 CD274Q9NZQ7 290 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 KIF17Q9P2E2 1029 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 TINAGQ9UJW2 476 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 PKP3Q9Y446 797 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 KCNMB2Q9Y691 235 aa15.4■□□□□ 0.06
RTN3-205ENST00000356000 YDJCA8MPS7 323 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 KIAA0513O60268 411 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 EEDO75530 441 aaKnown RBP15.39■□□□□ 0.05
RTN3-205ENST00000356000 RGS20O76081 388 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 ALDH1A1P00352 501 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 IFNA7P01567 189 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 SLC10A3P09131 477 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 YWHABP31946 246 aaKnown RBP15.39■□□□□ 0.05
RTN3-205ENST00000356000 RPL35P42766 123 aaKnown RBP15.39■□□□□ 0.05
RTN3-205ENST00000356000 RECQLP46063 649 aaPredicted RBP15.39■□□□□ 0.05
RTN3-205ENST00000356000 RIPPLY1Q0D2K3 151 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 PPP1R8Q12972 351 aaKnown RBP15.39■□□□□ 0.05
RTN3-205ENST00000356000 SIM2Q14190 667 aaPredicted RBP15.39■□□□□ 0.05
RTN3-205ENST00000356000 GPR68Q15743 365 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms