RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 OR1I1O60431 355 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 CBFA2T3O75081 653 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 EEDO75530 441 aaKnown RBP8.42□□□□□ -1.06
TRIM55-204ENST00000353317 RPP40O75818 363 aaKnown RBP8.42□□□□□ -1.06
TRIM55-204ENST00000353317 ZBTB11O95625 1053 aaPredicted RBP8.42□□□□□ -1.06
TRIM55-204ENST00000353317 TRBC1P01850 177 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 UMPSP11172 480 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 LHCGRP22888 699 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 TPP2P29144 1249 aaPredicted RBP8.42□□□□□ -1.06
TRIM55-204ENST00000353317 IL12AP29459 219 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 C21orf59P57076 290 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 BCL2L1Q07817 233 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 GRSF1Q12849 480 aaKnown RBP eCLIP8.42□□□□□ -1.06
TRIM55-204ENST00000353317 NFATC3Q12968 1075 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 TIGD2Q4W5G0 525 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 SETMARQ53H47 684 aaPredicted RBP8.42□□□□□ -1.06
TRIM55-204ENST00000353317 CARD16Q5EG05 197 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 IER5LQ5T953 404 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 ARMC12Q5T9G4 340 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 MRNIPQ6NTE8 343 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 UGT3A1Q6NUS8 523 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 PAQR3Q6TCH7 311 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 DCDC5Q6ZRR9 648 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 FBXO39Q8N4B4 442 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 OR2T11Q8NH01 316 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 TSPEARQ8WU66 669 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 ISG20Q96AZ6 181 aaKnown RBP8.42□□□□□ -1.06
TRIM55-204ENST00000353317 ACOX2Q99424 681 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 C1orf50Q9BV19 199 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 MUC13Q9H3R2 512 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 ZFP14Q9HCL3 533 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 ZMYM5Q9UJ78 669 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 MAGED1Q9Y5V3 778 aaPredicted RBP8.42□□□□□ -1.06
TRIM55-204ENST00000353317 NCF1BA6NI72 391 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-204ENST00000353317 NCF1CA8MVU1 366 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-204ENST00000353317 UPK1AO00322 258 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 KERAO60938 352 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 CRCPO75575 148 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 SLC22A3O75751 556 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 NCF1P14598 390 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-204ENST00000353317 POLR2EP19388 210 aaKnown RBP8.41□□□□□ -1.06
TRIM55-204ENST00000353317 EEF1B2P24534 225 aaKnown RBP8.41□□□□□ -1.06
TRIM55-204ENST00000353317 GJA4P35212 333 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 AGTR2P50052 363 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 STC1P52823 247 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 OR4D2P58180 307 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 TSNQ15631 228 aaKnown RBP8.41□□□□□ -1.06
TRIM55-204ENST00000353317 AASDHQ4L235 1098 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-204ENST00000353317 ATAT1Q5SQI0 421 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 XAF1Q6GPH4 301 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 SPATA19Q7Z5L4 167 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 SYVN1Q86TM6 617 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 DCBLD1Q8N8Z6 715 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 TERB1Q8NA31 727 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 PDPRQ8NCN5 879 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 DDHD1Q8NEL9 900 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 GPR150Q8NGU9 434 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 OR4L1Q8NH43 312 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 STAG3L4Q8TBR4 150 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 KIAA1191Q96A73 305 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 FUBP1Q96AE4 644 aaKnown RBP8.41□□□□□ -1.06
TRIM55-204ENST00000353317 ESAMQ96AP7 390 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 COX4I2Q96KJ9 171 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 TUBA1CQ9BQE3 449 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 AARSD1Q9BTE6 412 aaKnown RBP8.41□□□□□ -1.06
TRIM55-204ENST00000353317 ADGRE3Q9BY15 652 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 YTHDF1Q9BYJ9 559 aaKnown RBP8.41□□□□□ -1.06
TRIM55-204ENST00000353317 SUV39H2Q9H5I1 410 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 POPDC3Q9HBV1 291 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 RNF112Q9ULX5 631 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 DOLKQ9UPQ8 538 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 PCDHGA11Q9Y5H2 935 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 CORINQ9Y5Q5 1042 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 H0YAE9 185 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 H3BQ06 376 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-204ENST00000353317 J3QRK9 145 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 CDC7O00311 574 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 VPS4BO75351 444 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 ECI2O75521 394 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 LEFTY1O75610 366 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 IGSF6O95976 241 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 ALBP02768 609 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 RPS17P08708 135 aaKnown RBP8.41□□□□□ -1.06
TRIM55-204ENST00000353317 PORP16435 677 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-204ENST00000353317 CCNA2P20248 432 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 LPOP22079 712 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-204ENST00000353317 MAP4P27816 1152 aaKnown RBP8.41□□□□□ -1.06
TRIM55-204ENST00000353317 HTR1EP28566 365 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 SHMT2P34897 504 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 CCR3P51677 355 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 POLR2JP52435 117 aaKnown RBP8.41□□□□□ -1.06
TRIM55-204ENST00000353317 ARSFP54793 590 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 EEFSECP57772 596 aaKnown RBP8.41□□□□□ -1.06
TRIM55-204ENST00000353317 SNRPD1P62314 119 aaKnown RBP8.41□□□□□ -1.06
TRIM55-204ENST00000353317 PTSQ03393 145 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 GRIK2Q13002 908 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 CBX3Q13185 183 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 FXNQ16595 210 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 MOGQ16653 247 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 ARSIQ5FYB1 569 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms