RNA–Protein interactions for RNA: ENST00000351842.8

USP4-202, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 1 (best) BASIC

Gene USP4, Length 3,222 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-202ENST00000351842 IGF2RP11717 2491 aa8.96□□□□□ -0.97
USP4-202ENST00000351842 KIF26BQ2KJY2 2108 aa8.96□□□□□ -0.98
USP4-202ENST00000351842 A0A1B0GTL3 188 aa8.96□□□□□ -0.98
USP4-202ENST00000351842 ATP6AP2A0A1C7CYW4 349 aa8.96□□□□□ -0.98
USP4-202ENST00000351842 KHNYNO15037 678 aaKnown RBP8.96□□□□□ -0.98
USP4-202ENST00000351842 ATP6AP2O75787 350 aa8.96□□□□□ -0.98
USP4-202ENST00000351842 PVRP15151 417 aa8.96□□□□□ -0.98
USP4-202ENST00000351842 AMD1P17707 334 aa8.96□□□□□ -0.98
USP4-202ENST00000351842 TAC1P20366 129 aa8.96□□□□□ -0.98
USP4-202ENST00000351842 PRDX3P30048 256 aaKnown RBP8.96□□□□□ -0.98
USP4-202ENST00000351842 PCLAFQ15004 111 aa8.96□□□□□ -0.98
USP4-202ENST00000351842 PDCD2Q16342 344 aaPredicted RBP8.96□□□□□ -0.98
USP4-202ENST00000351842 CPSF6Q16630 551 aaKnown RBP eCLIP8.96□□□□□ -0.98
USP4-202ENST00000351842 TECRLQ5HYJ1 363 aa8.96□□□□□ -0.98
USP4-202ENST00000351842 METRNLQ641Q3 311 aa8.96□□□□□ -0.98
USP4-202ENST00000351842 IRGCQ6NXR0 463 aa8.96□□□□□ -0.98
USP4-202ENST00000351842 C6orf89Q6UWU4 347 aa8.96□□□□□ -0.98
USP4-202ENST00000351842 NAGSQ8N159 534 aa8.96□□□□□ -0.98
USP4-202ENST00000351842 SLC25A45Q8N413 288 aa8.96□□□□□ -0.98
USP4-202ENST00000351842 PRSS33Q8NF86 280 aa8.96□□□□□ -0.98
USP4-202ENST00000351842 CCT6BQ92526 530 aa8.96□□□□□ -0.98
USP4-202ENST00000351842 GPR78Q96P69 363 aa8.96□□□□□ -0.98
USP4-202ENST00000351842 PKP4Q99569 1192 aa8.96□□□□□ -0.98
USP4-202ENST00000351842 STOX2Q9P2F5 926 aaPredicted RBP8.96□□□□□ -0.98
USP4-202ENST00000351842 ZNF624Q9P2J8 865 aaPredicted RBP8.96□□□□□ -0.98
USP4-202ENST00000351842 TAC3Q9UHF0 121 aa8.96□□□□□ -0.98
USP4-202ENST00000351842 PTGDR2Q9Y5Y4 395 aa8.96□□□□□ -0.98
USP4-202ENST00000351842 PCDH15Q96QU1 1955 aa8.96□□□□□ -0.98
USP4-202ENST00000351842 TMEM131Q92545 1883 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 SLC5A10A0PJK1 596 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 TTC36A6NLP5 189 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 F8W8V4 182 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 AP2A2O94973 939 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 SBK3P0C264 359 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 SEPHS1P49903 392 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 KIAA1024LP59773 190 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 TCF15Q12870 199 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 GPR18Q14330 331 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 ELOCQ15369 112 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 SF1Q15637 639 aaKnown RBP8.95□□□□□ -0.98
USP4-202ENST00000351842 RPE65Q16518 533 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 TCHHL1Q5QJ38 904 aaPredicted RBP8.95□□□□□ -0.98
USP4-202ENST00000351842 SH2D5Q6ZV89 423 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 ADAMTSL2Q86TH1 951 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 NLRP8Q86W28 1048 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 NRROSQ86YC3 692 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 ZBTB44Q8NCP5 570 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 C1orf216Q8TAB5 229 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 DNASE2BQ8WZ79 361 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 NCSTNQ92542 709 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 FCRL4Q96PJ5 515 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 SLC38A3Q99624 504 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 MRPL57Q9BQC6 102 aaKnown RBP8.95□□□□□ -0.98
USP4-202ENST00000351842 ZDHHC5Q9C0B5 715 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 PPCSQ9HAB8 311 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 SPASTQ9UBP0 616 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 FETUBQ9UGM5 382 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 GIPC1O14908 333 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 LIN7AO14910 233 aaPredicted RBP8.95□□□□□ -0.98
USP4-202ENST00000351842 GPC4O75487 556 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 CSF2P04141 144 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 RBP1P09455 135 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 F3P13726 295 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 LSP1P33241 339 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 MDH1P40925 334 aaKnown RBP8.95□□□□□ -0.98
USP4-202ENST00000351842 SLC18A2Q05940 514 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 BST1Q10588 318 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 FRG1Q14331 258 aaKnown RBP8.95□□□□□ -0.98
USP4-202ENST00000351842 ACAP2Q15057 778 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 CYHR1Q6ZMK1 362 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 RAB44Q7Z6P3 723 aaPredicted RBP8.95□□□□□ -0.98
USP4-202ENST00000351842 TMPRSS11BQ86T26 416 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 CDYL2Q8N8U2 506 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 OR52B6Q8NGF0 335 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 CDC26Q8NHZ8 85 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 GATA5Q9BWX5 397 aaPredicted RBP8.95□□□□□ -0.98
USP4-202ENST00000351842 DERL2Q9GZP9 239 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 OR52A5Q9H2C5 316 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 TRIT1Q9H3H1 467 aaKnown RBP8.95□□□□□ -0.98
USP4-202ENST00000351842 PARVBQ9HBI1 364 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 NFKBIL1Q9UBC1 381 aaPredicted RBP8.95□□□□□ -0.98
USP4-202ENST00000351842 CPNE7Q9UBL6 633 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 SUSD2Q9UGT4 822 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 ATXN7L1Q9ULK2 861 aaPredicted RBP8.95□□□□□ -0.98
USP4-202ENST00000351842 BTRCQ9Y297 605 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 GOLGA8QA0A0J9YX86 632 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 GOLGA8OA6NCC3 632 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 OR6C74A6NCV1 312 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 RHPN2P1A8MT19 583 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 GOLGA8NF8WBI6 632 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 QSOX1O00391 747 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 EBAG9O00559 213 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 VILLO15195 856 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 PIAS2O75928 621 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 EIF2S1P05198 315 aaKnown RBP8.95□□□□□ -0.98
USP4-202ENST00000351842 ANXA5P08758 320 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 TPBGLP0DKB5 382 aa8.95□□□□□ -0.98
USP4-202ENST00000351842 NME1P15531 152 aaKnown RBP8.95□□□□□ -0.98
USP4-202ENST00000351842 AASDHQ4L235 1098 aaPredicted RBP8.95□□□□□ -0.98
USP4-202ENST00000351842 VWA5B1Q5TIE3 1220 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms