RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 NCLNQ969V3 563 aa21.49■■□□□ 1.03
NKX2-4-201ENST00000351817 MAGED4Q96JG8 741 aa21.49■■□□□ 1.03
NKX2-4-201ENST00000351817 DEFB118Q96PH6 123 aa21.49■■□□□ 1.03
NKX2-4-201ENST00000351817 PAIP1Q9H074 479 aaKnown RBP21.49■■□□□ 1.03
NKX2-4-201ENST00000351817 KCNH6Q9H252 994 aa21.49■■□□□ 1.03
NKX2-4-201ENST00000351817 ATP13A3Q9H7F0 1226 aa21.49■■□□□ 1.03
NKX2-4-201ENST00000351817 PAK6Q9NQU5 681 aaPredicted RBP21.49■■□□□ 1.03
NKX2-4-201ENST00000351817 GREM1O60565 184 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 GSTM2P28161 218 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 GKP32189 559 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 RPS14P62263 151 aaKnown RBP21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 GTDC1Q4AE62 458 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 LRIF1Q5T3J3 769 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 XAF1Q6GPH4 301 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 Q6ZNB5 142 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 MBOAT1Q6ZNC8 495 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 TPGS1Q6ZTW0 290 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 CALHM3Q86XJ0 350 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 OR5K1Q8NHB7 308 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 CLHC1Q8NHS4 586 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 ADAMTS19Q8TE59 1207 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 BHMTQ93088 406 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 ACDQ96AP0 544 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 PPP1R14BQ96C90 147 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 IGSF21Q96ID5 467 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 SLC22A12Q96S37 553 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 UTS2RQ9UKP6 389 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 MAN2B2Q9Y2E5 1009 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 PCDHB14Q9Y5E9 798 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 PCDHGA8Q9Y5G5 932 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 A0A096LPI6 279 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 NOBOXO60393 691 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 CXCL10P02778 98 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 BMP1P13497 986 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 IL1RNP18510 177 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 MAP4P27816 1152 aaKnown RBP21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 NSG1P42857 185 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 PTPN5P54829 565 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 CLDN8P56748 225 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 GABARAPL2P60520 117 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 NFATC3Q12968 1075 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 LAPTM5Q13571 262 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 ZNF829Q3KNS6 432 aaPredicted RBP21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 C6orf141Q5SZD1 244 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 SPESP1Q6UW49 350 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 DNAJB7Q7Z6W7 309 aaPredicted RBP21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 TMEM150AQ86TG1 271 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 PHACTR4Q8IZ21 702 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 EID3Q8N140 333 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 ZCCHC7Q8N3Z6 543 aaKnown RBP21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 SNX19Q92543 992 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 BORCS5Q969J3 196 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 ABTB1Q969K4 478 aaPredicted RBP21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 MTFMTQ96DP5 389 aaKnown RBP21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 FAM120BQ96EK7 910 aaKnown RBP21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 CPPED1Q9BRF8 314 aaPredicted RBP21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 ACPTQ9BZG2 426 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 AMBRA1Q9C0C7 1298 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 SLC32A1Q9H598 525 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 KLHL42Q9P2K6 505 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 BLOC1S6Q9UL45 172 aa21.48■■□□□ 1.03
NKX2-4-201ENST00000351817 AGAP14A8MT82 685 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 AREL1O15033 823 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 IGSF6O95976 241 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 IL7RP16871 459 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 CD247P20963 164 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 ATN1P54259 1190 aaPredicted RBP21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 ADGRG2Q8IZP9 1017 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 FAM9CQ8IZT9 166 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 CHDHQ8NE62 594 aaPredicted RBP21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 RMND5AQ9H871 391 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 PARVBQ9HBI1 364 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 TBC1D23Q9NUY8 699 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 PRPS2P11908 318 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 S100A3P33764 101 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 GGT5P36269 586 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 RPIAP49247 311 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 HTRA3P83110 453 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 KCNAB2Q13303 367 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 TOP3AQ13472 1001 aaPredicted RBP21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 CPSF6Q16630 551 aaKnown RBP eCLIP21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 ANKRD26P1Q6NSI1 321 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 HS3ST5Q8IZT8 346 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 TMEM132CQ8N3T6 1108 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 RAB2BQ8WUD1 216 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 ITCHQ96J02 903 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 LHPPQ9H008 270 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 SLC6A13Q9NSD5 602 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 RHBDL2Q9NX52 303 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 C3orf18Q9UK00 162 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 PDE10AQ9Y233 779 aa21.47■■□□□ 1.03
NKX2-4-201ENST00000351817 FOXD2O60548 495 aaPredicted RBP21.46■■□□□ 1.03
NKX2-4-201ENST00000351817 RECQL5O94762 991 aaPredicted RBP21.46■■□□□ 1.03
NKX2-4-201ENST00000351817 PDYNP01213 254 aa21.46■■□□□ 1.03
NKX2-4-201ENST00000351817 PIGAP37287 484 aa21.46■■□□□ 1.03
NKX2-4-201ENST00000351817 GZMMP51124 257 aa21.46■■□□□ 1.03
NKX2-4-201ENST00000351817 PHC1P78364 1004 aa21.46■■□□□ 1.03
NKX2-4-201ENST00000351817 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.46■■□□□ 1.03
NKX2-4-201ENST00000351817 Q6ZNX1 250 aa21.46■■□□□ 1.03
NKX2-4-201ENST00000351817 FAM217AQ8IXS0 508 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms